chrX : 125,202,511 – 125,202,705
194 bp 26 TFs 2 linked genes
This 194 bp open chromatin element is linked to TENM1 and ENSG00000232599 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TENM1 1.6 kb Proximal Proximity
ENSG00000232599 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:125,197,511 – 125,207,705
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 124 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 152 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 130 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 189 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 194 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 114 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 194 bp overlap
CBX8 4 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 81 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 194 bp overlap
ChIP K562 ENCFF485TBL 155 bp overlap
ChIP K562 ENCFF485TBL 194 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 146 bp overlap
EGR1 4 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 114 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 114 bp overlap
ChIP K562 ENCFF006PJY 187 bp overlap
ChIP K562 ENCFF895KGN 179 bp overlap
EZH2 17 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 194 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 194 bp overlap
ChIP PC-3 ENCFF855OUB 71 bp overlap
ChIP PC-3 ENCFF928VSN 194 bp overlap
ChIP PC-3 ENCFF928VSN 194 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 194 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 119 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 194 bp overlap
ChIP astrocyte ENCFF365JTP 163 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 194 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 194 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 194 bp overlap
ChIP keratinocyte ENCFF070STK 194 bp overlap
ChIP keratinocyte ENCFF070STK 161 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 113 bp overlap
ChIP neural progenitor cell ENCFF472NFV 194 bp overlap
ChIP neural progenitor cell ENCFF472NFV 194 bp overlap
FOXA1 14 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 172 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 115 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 63 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 94 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 181 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 70 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 114 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 93 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 68 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 129 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 138 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 124 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 153 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 194 bp overlap
FOXA2 3 datasets
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 171 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 194 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 109 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 98 bp overlap
JARID2 1 dataset
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 194 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 194 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 71 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 173 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 194 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 194 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 149 bp overlap
RNF2 7 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 57 bp overlap
ChIP H1 ENCFF239FFS 194 bp overlap
ChIP H1 ENCFF239FFS 85 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 194 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 190 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 185 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 60 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 194 bp overlap
SMARCA4 5 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 194 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 194 bp overlap
ChIP K562 ENCFF316MCJ 103 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 90 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 194 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 100 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 102 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 194 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 63 bp overlap
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