chrX : 69,563,274 69,563,876
602 bp 40 TFs 3 linked genes
This 602 bp open chromatin element is linked to ENSG00000228160, EDA, and NALF2 and is bound by 40 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ENSG00000228160 6.5 kb Proximal Proximity
EDA 52.6 kb Distal Multiome+HiCAR
NALF2 59.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:69,558,274 – 69,568,876
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
ATOH7 1 dataset
Motif DE_60h DE_60h-ATOH7_MA1468.1 10 bp overlap
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
Atoh1 1 dataset
Motif DE_60h DE_60h-Atoh1_MA0461.3 8 bp overlap
BHLHE22 1 dataset
Motif DE_60h DE_60h-BHLHE22_MA0818.2 10 bp overlap
CEBPA 8 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 199 bp overlap
ChIP HepG2 ENCFF175DFS 142 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 210 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 258 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 134 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 238 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 206 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 180 bp overlap
CEBPB 3 datasets
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF536NTI 221 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 289 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 231 bp overlap
ChIP BLaER1 ENCFF274GAT 290 bp overlap
ChIP BLaER1 ENCFF460KDD 347 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 480 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 408 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 601 bp overlap
ChIP DE DE-FOXA2-2 602 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 602 bp overlap
ChIP DE DE-GATA4-2 602 bp overlap
ChIP G296S GSE85628.GATA4.G296S 305 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 305 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 209 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 235 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 238 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 522 bp overlap
ChIP foregut GSE117136.GATA4.foregut 308 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 602 bp overlap
ChIP DE DE-GATA6-2 602 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 589 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 296 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 602 bp overlap
ChIP foregut GSE117136.GATA6.foregut 312 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 384 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 144 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 332 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 248 bp overlap
ChIP HepG2 ENCFF970YZO 315 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PAX3 1 dataset
Motif DE_60h DE_60h-PAX3_MA1546.2 14 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 602 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 602 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 538 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 444 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 583 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 421 bp overlap
TBR1 1 dataset
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 345 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 345 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 287 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 602 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 312 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 219 bp overlap
TCF21 1 dataset
Motif DE_60h DE_60h-TCF21_MA1568.2 10 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA1570.1 10 bp overlap
ZKSCAN1 3 datasets
ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF578KDY 244 bp overlap
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 173 bp overlap