chr21 : 38,995,212 38,995,827
615 bp 25 TFs 3 linked genes
This 615 bp open chromatin element is linked to PSMG1, ETS2, and BRWD1 and is bound by 25 transcription factors.
Linked Genes
3 genes
Link type
Gene Expression Dist. to TSS Distance Link type
PSMG1 187.9 kb Distal Multiome
ETS2 189.7 kb Distal Multiome+HiCAR
BRWD1 223.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:38,990,212 – 39,000,827
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
BRD4 5 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 199 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 194 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 555 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 256 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 61 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 56 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 184 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 267 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 459 bp overlap
ChIP DE DE-GATA4-2 594 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 430 bp overlap
ChIP DE DE-GATA6-2 615 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 543 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 496 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 476 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 510 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 487 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 364 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 110 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 219 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 62 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 413 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 324 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 397 bp overlap
MAX 1 dataset
ChIP melanocyte GSE115845.MAX.melanocyte 63 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 140 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 174 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 547 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 229 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 179 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 615 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 615 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 615 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 615 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 615 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 615 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 607 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 452 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 176 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 219 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 186 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 470 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 172 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 289 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 208 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 116 bp overlap