chr20 : 48,191,202 48,191,496
294 bp 38 TFs 1 linked gene
This 294 bp open chromatin element is linked to ENSG00000289072 and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000289072 869 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:48,186,202 – 48,196,496
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 294 bp overlap
BRD4 3 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 129 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 294 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 182 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 294 bp overlap
CTCF 82 datasets
ChIP AG04449 ENCFF248MBD 152 bp overlap
ChIP AG09309 ENCFF478XPS 180 bp overlap
ChIP BJ ENCFF434HEC 219 bp overlap
ChIP H9 ENCFF152GTF 116 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 175 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 157 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 226 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 163 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 142 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 169 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 189 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 131 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 103 bp overlap
ChIP MCF 10A ENCFF988BGF 168 bp overlap
ChIP MCF-7 ENCFF139NQI 211 bp overlap
ChIP MCF-7 ENCFF198DQX 191 bp overlap
ChIP MCF-7 ENCFF210JUZ 183 bp overlap
ChIP MCF-7 ENCFF414SZG 121 bp overlap
ChIP MCF-7 ENCFF424NQR 174 bp overlap
ChIP MCF-7 ENCFF494VXA 191 bp overlap
ChIP MCF-7 ENCFF844STM 174 bp overlap
ChIP MCF-7 ENCFF954TUV 146 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 264 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 149 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 131 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 113 bp overlap
ChIP Peyer's patch ENCFF701KWW 294 bp overlap
ChIP Peyer's patch ENCFF828IDE 263 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 248 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 174 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 216 bp overlap
ChIP RWPE2 ENCFF911IEE 294 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 184 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 137 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 214 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 157 bp overlap
ChIP chondrocyte ENCFF134ORZ 233 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 206 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 127 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 267 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 160 bp overlap
ChIP endodermal cell ENCFF471YCZ 224 bp overlap
ChIP endodermal cell ENCFF471YCZ 83 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 166 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 216 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 204 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 193 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 95 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 141 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 216 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 111 bp overlap
ChIP esophagus muscularis mucosa ENCFF421MEH 211 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 131 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 230 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 262 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 62 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 227 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 257 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 194 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 294 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 253 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 199 bp overlap
ChIP fibroblast_PEDAL_DIGIT_SKIN ENCSR000DPP.CTCF.fibroblast_PEDAL_DIGIT_SKIN 101 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 150 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 126 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 228 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 239 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 198 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 134 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 166 bp overlap
ChIP keratinocyte ENCFF667ULX 195 bp overlap
ChIP keratinocyte ENCFF805QIE 249 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 211 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 182 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 151 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 189 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 146 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 266 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 125 bp overlap
ChIP transverse colon ENCFF077CMZ 201 bp overlap
ChIP transverse colon ENCFF749DPF 294 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 294 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 157 bp overlap
ESR1 1 dataset
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 165 bp overlap
FOS 3 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 294 bp overlap
ChIP MCF-7 ENCFF282FWZ 294 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 294 bp overlap
FOSL2 6 datasets
ChIP MCF-7 ENCFF188KBZ 294 bp overlap
ChIP MCF-7 ENCFF716UWP 277 bp overlap
ChIP MCF-7 ENCSR546KCN.FOSL2.MCF-7 293 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 156 bp overlap
ChIP MCF-7_abemaciclib GSE157216.FOSL2.MCF-7_abemaciclib 241 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 190 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 291 bp overlap
ChIP DE DE-FOXA2-2 283 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 215 bp overlap
ChIP DE DE-GATA4-2 184 bp overlap
ChIP foregut GSE117136.GATA4.foregut 142 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 205 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 138 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 216 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 136 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 269 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 244 bp overlap
ChIP foregut GSE117136.GATA6.foregut 152 bp overlap
GTF2F1 1 dataset
ChIP MCF-7 ENCFF576OTX 243 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 107 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 92 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 294 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 294 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 294 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 294 bp overlap
ChIP MCF-7 ENCFF242UOB 233 bp overlap
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 180 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 294 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 251 bp overlap
ChIP MCF-7_abemaciclib GSE157218.JUNB.MCF-7_abemaciclib 294 bp overlap
MSX2 2 datasets
ChIP MCF-7 ENCFF179YRV 223 bp overlap
ChIP MCF-7 ENCFF179YRV 148 bp overlap
MYC 2 datasets
ChIP MCF-7 ENCFF542NWJ 220 bp overlap
ChIP MCF-7 ENCFF767RTQ 142 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 186 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 161 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 184 bp overlap
NFXL1 1 dataset
ChIP GM12878 ENCSR746XEG.NFXL1.GM12878 179 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 231 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 229 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF309IKZ 227 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 114 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 294 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 294 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 158 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR916BOH.RB1.GM12878 294 bp overlap
RNF2 1 dataset
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 294 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 150 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 74 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 74 bp overlap
SMC1 2 datasets
ChIP HAP1 GSE94992.SMC1.HAP1 217 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 294 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 294 bp overlap
SREBF1 1 dataset
ChIP MCF-7 ENCFF254QOR 52 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 294 bp overlap
STAT3 1 dataset
ChIP MCF-7 GSE152203.STAT3.MCF-7 176 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 215 bp overlap
TRIM22 2 datasets
ChIP MCF-7 ENCFF596XRL 293 bp overlap
ChIP MCF-7 ENCFF596XRL 59 bp overlap
ZNF579 2 datasets
ChIP MCF-7 ENCFF550XRS 184 bp overlap
ChIP MCF-7 ENCSR018MQH.ZNF579.MCF-7 146 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 131 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 256 bp overlap