chr20 : 2,510,228 2,510,373
145 bp 28 TFs 2 linked genes
This 145 bp open chromatin element is linked to ZNF343 and ENSG00000256566 and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF343 1.1 kb Proximal Proximity
ENSG00000256566 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:2,505,228 – 2,515,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K562 ENCFF921JQW 128 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 145 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 121 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF739JDE 66 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 136 bp overlap
EZH2 1 dataset
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 145 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 63 bp overlap
ChIP K562 ENCFF455MKD 145 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 76 bp overlap
ChIP DE DE-FOXA2-1 145 bp overlap
ChIP DE DE-FOXA2-2 145 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 145 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 100 bp overlap
GATA2 1 dataset
ChIP HepG2 ENCFF905PYM 145 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 119 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 145 bp overlap
ChIP DE DE-GATA4-2 145 bp overlap
ChIP foregut GSE117136.GATA4.foregut 145 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 145 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 145 bp overlap
GATA6 13 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 123 bp overlap
ChIP DE DE-GATA6-1 145 bp overlap
ChIP DE DE-GATA6-2 145 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 145 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 145 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 145 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 145 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 145 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 145 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 145 bp overlap
ChIP foregut GSE117136.GATA6.foregut 145 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 145 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 84 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 86 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 56 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 65 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 59 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 70 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 53 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 145 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 145 bp overlap
SATB2 1 dataset
ChIP HepG2 ENCFF749IAK 130 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 145 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 145 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 145 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 145 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 145 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 145 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 145 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 62 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 109 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 145 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 145 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 66 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 134 bp overlap
ZNF850 1 dataset
ChIP HepG2 ENCFF671RTH 145 bp overlap