chr20 : 955,007 955,547
540 bp 24 TFs 5 linked genes
This 540 bp open chromatin element is linked to 5 target genes and is bound by 24 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
FAM110A 121.5 kb Distal Multiome+HiCAR
ENSG00000286787 163.2 kb Distal Multiome+HiCAR
PSMF1 163.3 kb Distal Multiome+HiCAR
SLC52A3 179.3 kb Distal Multiome
TMEM74B 230.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:950,007 – 960,547
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 103 bp overlap
CTCF 3 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 76 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 444 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 350 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 346 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 230 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 393 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 113 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 501 bp overlap
ChIP DE DE-FOXA2-2 389 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 374 bp overlap
ChIP DE DE-GATA4-2 479 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 372 bp overlap
ChIP DE DE-GATA6-2 522 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 479 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 466 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 486 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 540 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 540 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 540 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 385 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 304 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 395 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 362 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 261 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 540 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 540 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 397 bp overlap
REST 3 datasets
ChIP H1 ENCFF429RUE 114 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 83 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 79 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 540 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 540 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 540 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 485 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 416 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 504 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 540 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 540 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 147 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 419 bp overlap
SMC1 1 dataset
ChIP HCT-116 GSE131606.SMC1.HCT-116 373 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 353 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 517 bp overlap
ZKSCAN1 3 datasets
ChIP HepG2 ENCFF578KDY 84 bp overlap
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 143 bp overlap
ChIP K562 ENCFF977CBA 179 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 115 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 186 bp overlap