chr19 : 45,156,307 45,156,500
193 bp 33 TFs 1 linked gene
This 193 bp open chromatin element is linked to NKPD1 and is bound by 33 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NKPD1 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:45,151,307 – 45,161,500
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 158 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 74 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 139 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 193 bp overlap
BRD4 4 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 193 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 77 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 193 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 168 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 141 bp overlap
CTCF 3 datasets
ChIP HFFc6 ENCFF005CJI 83 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 125 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 193 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 193 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 170 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 193 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 119 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 113 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 71 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 100 bp overlap
PBX2 2 datasets
ChIP Hep-G2 ENCSR849DFF.PBX2.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF225AJT 193 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 154 bp overlap
PKNOX1 7 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 193 bp overlap
ChIP HEK293T ENCFF174WDB 193 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 193 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 193 bp overlap
ChIP K562 ENCFF236IUS 193 bp overlap
ChIP MCF-7 ENCFF116OCS 193 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 193 bp overlap
POLR2A 2 datasets
ChIP neural cell ENCFF604SPB 193 bp overlap
ChIP neural cell ENCFF604SPB 116 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 141 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 125 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 106 bp overlap
RBM39 3 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 51 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 50 bp overlap
ChIP HepG2 ENCFF084YZE 193 bp overlap
RELA 10 datasets
ChIP 786-O GSE86092.RELA.786-O 193 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 86 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 85 bp overlap
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 74 bp overlap
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 75 bp overlap
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 118 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 75 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 68 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 60 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 57 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 186 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 111 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 91 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 137 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 193 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 89 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 92 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 193 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 193 bp overlap
ZNF350 1 dataset
ChIP HepG2 ENCFF595LWL 193 bp overlap