Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

CBX2 1 dataset

ChIP HEK293T GSE34774.CBX2.HEK293T 261 bp overlap

CTCF 9 datasets

ChIP HEK293 ENCFF498RMM 113 bp overlap

ChIP HEK293 ENCSR000DTW.CTCF.HEK293 51 bp overlap

ChIP K-562 ENCSR000AKO.CTCF.K-562 102 bp overlap

ChIP K-562 ENCSR000DMA.CTCF.K-562 54 bp overlap

ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 73 bp overlap

ChIP K562 ENCFF082GOI 67 bp overlap

ChIP K562 ENCFF400DFR 102 bp overlap

ChIP K562 ENCFF430KTH 194 bp overlap

ChIP endodermal cell ENCFF471YCZ 227 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 114 bp overlap

DDX5 1 dataset

ChIP NTERA2 GSE58641.DDX5.NTERA2 393 bp overlap

DPF2 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 227 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 425 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 271 bp overlap

EZH2 4 datasets

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 70 bp overlap

ChIP T98G GSE112240.EZH2.T98G 453 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 278 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 106 bp overlap

FEZF2 2 datasets

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 492 bp overlap

ChIP DE DE-FOXA2-2 467 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 451 bp overlap

ChIP DE DE-GATA4-2 562 bp overlap

GATA5 2 datasets

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 453 bp overlap

ChIP DE DE-GATA6-2 599 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 457 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 513 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 457 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 523 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 444 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 535 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 648 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 377 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 492 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 476 bp overlap

KMT2C 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap

KMT2D 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 300 bp overlap

MEIS1 2 datasets

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap

NFKB1 1 dataset

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap

NR2C1 1 dataset

Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap

Nr2F6 1 dataset

Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap

PBX3 2 datasets

Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap

Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap

PKNOX1 2 datasets

Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap

Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 467 bp overlap

RARA 2 datasets

Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap

Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap

Rarb 1 dataset

Motif DE_72h DE_72h-Rarb_MA0857.1 16 bp overlap

Rarg 2 datasets

Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap

Motif DE_72h DE_72h-Rarg_MA0859.2 15 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 715 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 354 bp overlap

SMARCA4 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 444 bp overlap

SMARCC1 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 312 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 448 bp overlap

SS18 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 368 bp overlap

VDR 1 dataset

ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 141 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 290 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 471 bp overlap

ZNF135 1 dataset

Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap

ZNF213 2 datasets

Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap

Motif DE_72h DE_72h-ZNF213_MA2121.1 12 bp overlap

Gene	Dist. to TSS	Distance	Link type
ENSG00000290606	188.3 kb	Distal	Multiome
UQCRFS1	297.2 kb	Distal	Multiome
POP4	690.3 kb	Distal	Multiome+HiCAR

Genome Browser