chr18 : 46,657,223 46,657,569
346 bp 29 TFs 1 linked gene
This 346 bp open chromatin element is linked to LOXHD1 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LOXHD1 3 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:46,652,223 – 46,662,569
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CTCF 4 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 154 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 101 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 217 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 201 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 139 bp overlap
ERG 3 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 233 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 346 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 185 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 86 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 296 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 346 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 279 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 128 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 316 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 346 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 346 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 335 bp overlap
POLR2A 2 datasets
ChIP SK-N-MC ENCFF088IVG 309 bp overlap
ChIP SK-N-MC ENCFF088IVG 316 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 193 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 346 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 346 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 255 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 126 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 160 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 151 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 186 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 346 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 109 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 181 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 227 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 234 bp overlap
USF1 3 datasets
ChIP WA01 ENCSR000BIU.USF1.WA01 179 bp overlap
ChIP WTC11 ENCFF699QGS 314 bp overlap
ChIP WTC11 ENCFF699QGS 113 bp overlap
YY1 1 dataset
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 98 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 252 bp overlap
ZNF398 2 datasets
ChIP BG01V GSE133630.ZNF398.BG01V 206 bp overlap
ChIP H9 GSE133630.ZNF398.H9 212 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 237 bp overlap