Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

52 transcription factors

BRD4 1 dataset

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 256 bp overlap

CTCF 1 dataset

ChIP endodermal cell ENCFF471YCZ 191 bp overlap

Crx 2 datasets

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap

DPRX 2 datasets

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap

DUX4 1 dataset

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Dmbx1 2 datasets

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap

Dux 1 dataset

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EZH2 2 datasets

ChIP LNCaP GSE39459.EZH2.LNCaP 232 bp overlap

ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap

FIGLA 1 dataset

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 929 bp overlap

ChIP DE DE-FOXA2-2 831 bp overlap

GATA1::TAL1 2 datasets

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 798 bp overlap

ChIP DE DE-GATA4-2 1007 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 877 bp overlap

ChIP DE DE-GATA6-2 928 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 443 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 344 bp overlap

ChIP foregut GSE117136.GATA6.foregut 369 bp overlap

GSC 2 datasets

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap

GSC2 2 datasets

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap

HOXC13 2 datasets

Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap

Motif DE_72h DE_72h-HOXC13_MA0907.2 9 bp overlap

Hand1 3 datasets

Motif DE_48h DE_48h-Hand1_MA2123.1 9 bp overlap

Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap

Motif DE_72h DE_72h-Hand1_MA2123.1 9 bp overlap

Hand1::Tcf3 3 datasets

Motif DE_48h DE_48h-Hand1Tcf3_MA0092.2 9 bp overlap

Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap

Motif DE_72h DE_72h-Hand1Tcf3_MA0092.2 9 bp overlap

JUND 1 dataset

Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap

MEF2A 1 dataset

Motif DE_60h DE_60h-MEF2A_MA0052.5 10 bp overlap

MEF2C 1 dataset

Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap

MITF 4 datasets

ChIP 501-mel GSE137522.MITF.501-mel 377 bp overlap

ChIP 501-mel GSE61965.MITF.501-mel 274 bp overlap

ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 374 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 377 bp overlap

MNT 2 datasets

ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 248 bp overlap

ChIP HepG2 ENCFF701PYP 385 bp overlap

NEUROD1 1 dataset

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 195 bp overlap

NFATC3 2 datasets

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap

Nfat5 2 datasets

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 2 datasets

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 2 datasets

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap

OTX1 2 datasets

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap

PHF19 1 dataset

ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 282 bp overlap

PITX1 2 datasets

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap

PITX3 2 datasets

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap

POU1F1 2 datasets

Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap

Motif DE_72h DE_72h-POU1F1_MA0784.3 14 bp overlap

Prdm5 2 datasets

Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap

Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap

REL 3 datasets

Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap

Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap

Motif DE_72h DE_72h-REL_MA0101.1 10 bp overlap

RHOXF1 2 datasets

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap

SMAD2 4 datasets

Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap

Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap

Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 231 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 913 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 328 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 344 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 255 bp overlap

SNAI3 1 dataset

Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap

SPIB 2 datasets

Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap

Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap

Six3 1 dataset

Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap

Spi1 2 datasets

Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap

Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap

TCF3 1 dataset

ChIP K-562 ENCSR970OJY.TCF3.K-562 155 bp overlap

TFE3 1 dataset

ChIP K562 ENCFF697ABG 317 bp overlap

USF2 1 dataset

ChIP K-562 ENCSR578KEN.USF2.K-562 115 bp overlap

ZEB1 1 dataset

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF143 1 dataset

Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap

ZNF354A 2 datasets

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap

ZNF76 1 dataset

Motif DE_60h DE_60h-ZNF76_MA1716.2 17 bp overlap

Zfp809 2 datasets

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap

Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap

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