chr18 : 37,570,458 37,570,836
378 bp 34 TFs 1 linked gene
This 378 bp open chromatin element is linked to ENSG00000285940 and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000285940 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:37,565,458 – 37,575,836
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 281 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 255 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap
CTCF 88 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 205 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 149 bp overlap
ChIP A549 ENCFF182TCQ 178 bp overlap
ChIP BE2C ENCFF757SRF 269 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 201 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 151 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF531QOI 234 bp overlap
ChIP GM23338 ENCFF772DML 183 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 196 bp overlap
ChIP H1 ENCFF764RHO 184 bp overlap
ChIP H9 ENCFF152GTF 265 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 167 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 170 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 237 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 262 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 243 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 154 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 233 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 228 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 111 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 327 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 217 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 204 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 213 bp overlap
ChIP MCF-7 ENCFF198DQX 223 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 223 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 154 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 186 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 139 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 238 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 236 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 205 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 269 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 151 bp overlap
ChIP SK-N-SH ENCFF731NJX 193 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 146 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 213 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 195 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 123 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 180 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 157 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 144 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 214 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 173 bp overlap
ChIP brain ENCFF099ASU 378 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 275 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 189 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 245 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 159 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 152 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 147 bp overlap
ChIP endodermal cell ENCFF471YCZ 256 bp overlap
ChIP endodermal cell ENCFF471YCZ 333 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 256 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 199 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 226 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 245 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 179 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 205 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 212 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 172 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 231 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 194 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 205 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 233 bp overlap
ChIP islet ERP004003.CTCF.islet 218 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 166 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 141 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 231 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 188 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 333 bp overlap
ChIP neural progenitor cell ENCFF420RBO 236 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 272 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 157 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 190 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 200 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 156 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 167 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 349 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 139 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
EZH2 3 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 250 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 173 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 297 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
FOXE1 1 dataset
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
Hand1 2 datasets
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 378 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 350 bp overlap
KLF17 1 dataset
Motif ES_0h ES_0h-KLF17_MA1514.2 14 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
NFKB1 1 dataset
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NR1I2 1 dataset
Motif ES_0h ES_0h-NR1I2_MA1533.2 15 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 215 bp overlap
RAD21 19 datasets
ChIP H1 ENCFF698EWO 192 bp overlap
ChIP H1 ENCFF967OJF 171 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 119 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 164 bp overlap
ChIP SK-N-SH ENCFF747MAS 242 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 205 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 281 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 254 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 208 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 214 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 235 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 173 bp overlap
ChIP hiPSC_IID12 GSE106870.RAD21.hiPSC_IID12 130 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 228 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 296 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 238 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 222 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 325 bp overlap
ChIP neural cell ENCFF564MOT 365 bp overlap
RUNX3 1 dataset
Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 127 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 103 bp overlap
SMAD2 2 datasets
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 153 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 374 bp overlap
SMC3 4 datasets
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 121 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 181 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 331 bp overlap
ChIP neural cell ENCFF795YGY 378 bp overlap
STAG1 3 datasets
ChIP CHRF28811 ERP008568.STAG1.CHRF28811 218 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 131 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 129 bp overlap
STAT3 1 dataset
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 200 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 378 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 243 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 172 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap