chr18 : 31,240,763 31,241,341
578 bp 55 TFs 0 linked genes
This 578 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:31,235,763 – 31,246,341
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ATF1 1 dataset
ChIP K562 ENCFF817JQF 561 bp overlap
ATF2 2 datasets
ChIP K-562 ENCSR869IUD.ATF2.K-562 302 bp overlap
ChIP K562 ENCFF139ZZG 281 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 261 bp overlap
BRD4 4 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 233 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 81 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 501 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 477 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 3 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 141 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 130 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 4 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 471 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 578 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 578 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXA1 2 datasets
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 153 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 57 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 460 bp overlap
ChIP DE DE-FOXA2-2 389 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 378 bp overlap
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 470 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 404 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 371 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 508 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 130 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
MED1 2 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 63 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 421 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
NANOG 3 datasets
ChIP WA01 ERP004238.NANOG.WA01 183 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 232 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 230 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 498 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 285 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 241 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 342 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 373 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 279 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 352 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 465 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
WDR5 1 dataset
ChIP breast-cancer_shLuc GSE113279.WDR5.breast-cancer_shLuc 276 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 203 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap