chr2 : 3,706,746 3,707,147
401 bp 28 TFs 2 linked genes
This 401 bp open chromatin element is linked to ENSG00000224661 and DCDC2C and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000224661 2.6 kb Proximal Proximity
DCDC2C 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:3,701,746 – 3,712,147
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
AR 16 datasets
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 55 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 113 bp overlap
ChIP prostate GSE56288.AR.prostate 119 bp overlap
ChIP prostate GSE65478.AR.prostate 108 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 132 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 151 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 117 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 100 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 85 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 118 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 56 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 67 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 88 bp overlap
ChIP prostate_P7 GSE130408.AR.prostate_P7 56 bp overlap
ChIP prostate_normal_1335 GSE118845.AR.prostate_normal_1335 119 bp overlap
ChIP prostate_normal_1609 GSE118845.AR.prostate_normal_1609 105 bp overlap
ARNT 1 dataset
ChIP A-549 GSE85352.ARNT.A-549 241 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 131 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 210 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 86 bp overlap
EZH2 4 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 401 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 401 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 81 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 217 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 63 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 86 bp overlap
ChIP HepG2 ENCFF570ABM 58 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 127 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 154 bp overlap
MED12 3 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 65 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 65 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 56 bp overlap
MYC 1 dataset
ChIP OVCAR-3 GSE154941.MYC.OVCAR-3 298 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 244 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 79 bp overlap
NR4A1 1 dataset
ChIP K-562 ENCSR692RET.NR4A1.K-562 278 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PGR 2 datasets
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 234 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 50 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 149 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 169 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 138 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP NB4 GSE128834.SPI1.NB4 86 bp overlap
STAT3 2 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 225 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 269 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 216 bp overlap
TEAD4 2 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 191 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 165 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap