Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

38 transcription factors

BCL11A 1 dataset

ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 68 bp overlap

CDKN1B 1 dataset

ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 81 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 553 bp overlap

CTCF 2 datasets

ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 119 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF277CZQ 367 bp overlap

ESR1 1 dataset

ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 178 bp overlap

FOS 2 datasets

ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 136 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 249 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 553 bp overlap

ChIP DE DE-FOXA2-2 553 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 326 bp overlap

ChIP DE DE-GATA4-2 553 bp overlap

GATA6 1 dataset

ChIP DE DE-GATA6-2 553 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 193 bp overlap

HDGF 1 dataset

ChIP K-562 ENCSR197ALX.HDGF.K-562 145 bp overlap

HNRNPUL1 2 datasets

ChIP K-562 ENCSR296MXW.HNRNPUL1.K-562 247 bp overlap

ChIP K-562 GSE120104.HNRNPUL1.K-562 173 bp overlap

HOXB13 1 dataset

ChIP G-401 GSE65381.HOXB13.G-401 181 bp overlap

MED1 1 dataset

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 199 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 306 bp overlap

MYNN 1 dataset

ChIP K-562 ENCSR737LTZ.MYNN.K-562 228 bp overlap

NEUROD1 3 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 179 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 183 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 268 bp overlap

NR2F2 1 dataset

ChIP K-562 ENCSR000BRS.NR2F2.K-562 163 bp overlap

OLIG2 1 dataset

ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 369 bp overlap

PAF1 1 dataset

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 553 bp overlap

PML 1 dataset

ChIP K-562 ENCSR000BQY.PML.K-562 138 bp overlap

POLR2A 7 datasets

ChIP GM12892 ENCFF542ZFO 318 bp overlap

ChIP GM23338 ENCFF450WCS 238 bp overlap

ChIP HL-60 ENCFF321XKE 485 bp overlap

ChIP HepG2 ENCFF718XAJ 210 bp overlap

ChIP K562 ENCFF137JSF 351 bp overlap

ChIP K562 ENCFF215CWW 553 bp overlap

ChIP K562 ENCFF262YXJ 461 bp overlap

RBM39 2 datasets

ChIP K-562 ENCSR764OXF.RBM39.K-562 247 bp overlap

ChIP K-562 GSE120104.RBM39.K-562 183 bp overlap

RPA2_phospho 3 datasets

ChIP HeLa GSE108172.RPA2_phospho.HeLa 419 bp overlap

ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 240 bp overlap

ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 255 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 553 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 303 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 423 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 307 bp overlap

SMAD5 2 datasets

ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 135 bp overlap

ChIP K-562 ENCSR000FCD.SMAD5.K-562 314 bp overlap

SMARCA4 2 datasets

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 415 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 553 bp overlap

SMARCC1 2 datasets

ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 146 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 297 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 185 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 193 bp overlap

SUPT5H 4 datasets

ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 307 bp overlap

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 179 bp overlap

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 182 bp overlap

ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 103 bp overlap

SUPT6H 1 dataset

ChIP HCT-116 GSE130509.SUPT6H.HCT-116 139 bp overlap

ZBTB40 3 datasets

ChIP HepG2 ENCFF130IRD 508 bp overlap

ChIP K-562 ENCSR237VLT.ZBTB40.K-562 421 bp overlap

ChIP K562 ENCFF521DSV 394 bp overlap

ZBTB48 2 datasets

ChIP HEK293 ENCFF809BPK 457 bp overlap

ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 316 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 312 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 99 bp overlap

ZNF550 1 dataset

ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 114 bp overlap

Genome Browser