chr17 : 9,811,573 – 9,812,280
707 bp 42 TFs 2 linked genes
This 707 bp open chromatin element is linked to USP43 and STX8 and is bound by 42 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
USP43 166.4 kb Distal Multiome
STX8 236.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:9,806,573 – 9,817,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
BCL6 3 datasets
Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
Motif DE_72h DE_72h-BCL6_MA0463.3 13 bp overlap
DUX4 4 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 488 bp overlap
DUXA 3 datasets
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dux 3 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 459 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 134 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 291 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 483 bp overlap
ChIP DE DE-FOXA2-2 481 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 626 bp overlap
ChIP DE DE-GATA4-2 699 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 249 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 140 bp overlap
ChIP foregut GSE117136.GATA4.foregut 635 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 533 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 386 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 352 bp overlap
ChIP AGS GSE51936.GATA6.AGS 85 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 230 bp overlap
ChIP DE DE-GATA6-1 593 bp overlap
ChIP DE DE-GATA6-2 707 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 592 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 616 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 667 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 667 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 707 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 690 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 133 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 270 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 649 bp overlap
ChIP foregut GSE117136.GATA6.foregut 650 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 405 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 376 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 359 bp overlap
IRF6 2 datasets
Motif DE_48h DE_48h-IRF6_MA1509.1 9 bp overlap
Motif DE_72h DE_72h-IRF6_MA1509.1 9 bp overlap
ISL2 8 datasets
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 469 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 410 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 452 bp overlap
Lef1 1 dataset
Motif DE_48h DE_48h-Lef1_MA0768.3 8 bp overlap
NFATC4 2 datasets
Motif DE_48h DE_48h-NFATC4_MA1525.3 9 bp overlap
Motif DE_72h DE_72h-NFATC4_MA1525.3 9 bp overlap
NFIL3 5 datasets
Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap
Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap
Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap
Motif DE_72h DE_72h-NFIL3_MA0025.3 9 bp overlap
Motif DE_72h DE_72h-NFIL3_MA0025.3 9 bp overlap
NKX2-5 1 dataset
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 131 bp overlap
Nanog 3 datasets
Motif DE_48h DE_48h-Nanog_MA2339.1 7 bp overlap
Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap
Motif DE_72h DE_72h-Nanog_MA2339.1 7 bp overlap
Nkx3-2 2 datasets
Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap
Motif DE_72h DE_72h-Nkx3-2_MA0122.4 10 bp overlap
Nr2e1 2 datasets
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_72h DE_72h-Nr2e1_MA0676.1 9 bp overlap
PHOX2A 3 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF759BBR 284 bp overlap
Pgr 3 datasets
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
Motif DE_48h DE_48h-Pgr_MA2323.1 17 bp overlap
Motif DE_72h DE_72h-Pgr_MA2323.1 17 bp overlap
RBPJ 3 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 564 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 707 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 700 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 332 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 691 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 581 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 470 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 567 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 619 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 177 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 425 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 574 bp overlap
Stat6 1 dataset
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 322 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 235 bp overlap
TBX5 7 datasets
ChIP G296S GSE85628.TBX5.G296S 345 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 345 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 278 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 278 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 404 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 120 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 203 bp overlap
TCF7L2 2 datasets
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
Tfcp2l1 2 datasets
Motif DE_48h DE_48h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_72h DE_72h-Tfcp2l1_MA0145.2 14 bp overlap
ZNF331 5 datasets
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap
Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
ZNF384 3 datasets
Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap
Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap
Motif DE_72h DE_72h-ZNF384_MA1125.2 8 bp overlap
ZNF652 2 datasets
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF667 2 datasets
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZNF692 1 dataset
Motif DE_72h DE_72h-ZNF692_MA1986.2 8 bp overlap
Zfp335 2 datasets
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
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