chr16 : 49,849,600 – 49,849,933
333 bp 34 TFs 2 linked genes
This 333 bp open chromatin element is linked to ENSG00000275155 and ZNF423 and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000275155 2.0 kb Proximal Proximity
ZNF423 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:49,844,600 – 49,854,933
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 301 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCFF037PYH 117 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 333 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 279 bp overlap
ChIP BLaER1 ENCFF335XTP 333 bp overlap
ChIP BLaER1 ENCFF346MCV 333 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 333 bp overlap
ChIP neural cell ENCFF442QNK 244 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 179 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 107 bp overlap
EZH2 7 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 135 bp overlap
ChIP HeLa-S3 ENCFF318LHU 62 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 114 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 168 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 226 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 333 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 186 bp overlap
EZH2_phosphoT487 1 dataset
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 333 bp overlap
FOXA1 25 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 189 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 262 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 98 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 271 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 270 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 182 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 333 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 116 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 114 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 86 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 148 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 88 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 114 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 124 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 196 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 71 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 193 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 315 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 185 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 149 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 204 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 142 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 254 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 333 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 333 bp overlap
FOXA2 13 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 104 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 61 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 109 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 143 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 265 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 259 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 300 bp overlap
ChIP DE DE-FOXA2-1 333 bp overlap
ChIP DE DE-FOXA2-2 333 bp overlap
ChIP HepG2 ENCFF533COJ 150 bp overlap
ChIP HepG2 ENCFF570ABM 153 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 154 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 333 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF437NQS 54 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 145 bp overlap
ChIP DE DE-GATA4-1 333 bp overlap
ChIP DE DE-GATA4-2 333 bp overlap
ChIP foregut GSE117136.GATA4.foregut 110 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 333 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 333 bp overlap
GATA6 7 datasets
ChIP AGS GSE51705.GATA6.AGS 58 bp overlap
ChIP DE DE-GATA6-1 310 bp overlap
ChIP DE DE-GATA6-2 333 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 79 bp overlap
ChIP foregut GSE117136.GATA6.foregut 86 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 180 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 318 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 141 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 136 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 192 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 296 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 111 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 177 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 195 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 333 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 144 bp overlap
ChIP neural cell ENCFF882LXX 288 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 206 bp overlap
SMARCA4 3 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 292 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 301 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 333 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 333 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 333 bp overlap
SOX2 7 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 291 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 333 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 318 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 333 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 333 bp overlap
ChIP NPC GSE122631.SOX2.NPC 164 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 162 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 160 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 133 bp overlap
TP53 1 dataset
ChIP IMR-90 GSE42728.TP53.IMR-90 115 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 91 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 53 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 155 bp overlap
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