Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

ASXL3 1 dataset

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 599 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 426 bp overlap

BAP1 2 datasets

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 448 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 524 bp overlap

BRD4 7 datasets

ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 636 bp overlap

ChIP MM1-S GSE43743.BRD4.MM1-S 182 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 584 bp overlap

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 436 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 571 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 429 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 178 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 564 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF896HSY 223 bp overlap

Ddit3::Cebpa 2 datasets

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 495 bp overlap

ChIP DE DE-FOXA2-2 526 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 284 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 144 bp overlap

KLF5 1 dataset

Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap

MAZ 1 dataset

Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 627 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 136 bp overlap

ChIP hESC GSE18292.NANOG.hESC 132 bp overlap

NFATC3 1 dataset

ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 172 bp overlap

Nr2e3 2 datasets

Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap

Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap

ONECUT1 3 datasets

ChIP H9 ERP004206.ONECUT1.H9 379 bp overlap

ChIP liver ERP002306.ONECUT1.liver 240 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 605 bp overlap

ONECUT2 1 dataset

ChIP A-549 GSE102599.ONECUT2.A-549 190 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap

RARA 1 dataset

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 181 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 221 bp overlap

SIX1 2 datasets

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap

SIX2 3 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 179 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 465 bp overlap

ChIP hESC GSE18292.SOX2.hESC 99 bp overlap

SP4 1 dataset

Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

Six4 2 datasets

Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap

Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap

TRIM22 1 dataset

ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 297 bp overlap

ZKSCAN1 1 dataset

Motif ES_0h ES_0h-ZKSCAN1_MA1585.2 9 bp overlap

ZKSCAN3 2 datasets

Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap

Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap

ZNF148 1 dataset

Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 160 bp overlap

ZNF534 1 dataset

ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap

ZSCAN4 2 datasets

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap

Genome Browser