chr13 : 51,282,312 – 51,282,552
240 bp 28 TFs 0 linked genes
This 240 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:51,277,312 – 51,287,552
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
AR 48 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 86 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 239 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 178 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 175 bp overlap
ChIP LNCaP GSE121021.AR.LNCaP 106 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 57 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 179 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 240 bp overlap
ChIP LNCaP_1F5 GSE30623.AR.LNCaP_1F5 115 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 92 bp overlap
ChIP LNCaP_D226N_shFOXA1_Ethanol GSE128883.AR.LNCaP_D226N_shFOXA1_Ethanol 86 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 185 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 103 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 238 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 83 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 238 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 146 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 136 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 152 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 152 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 114 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 103 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 151 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 89 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 194 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 182 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 240 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 84 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 175 bp overlap
ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 124 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 161 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 193 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 110 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 138 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 200 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 228 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 125 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 148 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 104 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 172 bp overlap
ChIP prostate GSE56288.AR.prostate 89 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 156 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 240 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 132 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 189 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 120 bp overlap
ChIP prostate-cancer_shCXXC5 GSE136128.AR.prostate-cancer_shCXXC5 118 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 87 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 155 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 202 bp overlap
CTCF 11 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 102 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 147 bp overlap
ChIP H1 ENCFF764RHO 113 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 130 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 133 bp overlap
ChIP Loucy ENCFF359TVQ 218 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 205 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 158 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 80 bp overlap
ChIP heart left ventricle ENCFF987PUT 240 bp overlap
ChIP right lobe of liver ENCFF011NDG 240 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 128 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 150 bp overlap
ESR1 15 datasets
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 167 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 51 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 162 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 176 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 103 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 75 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 132 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 147 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 130 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 76 bp overlap
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 234 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 80 bp overlap
ChIP breast_tumor_Male_18 GSE104399.ESR1.breast_tumor_Male_18 141 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 164 bp overlap
ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 128 bp overlap
FOXA1 73 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 191 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 218 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 240 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 143 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 111 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 207 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 133 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 198 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 189 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 240 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 194 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 169 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.FOXA1.LNCaP_1F5_SIFOXA1 131 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 157 bp overlap
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 176 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 134 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 240 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 183 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 216 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 215 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 103 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 130 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 161 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 104 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 97 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 190 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 157 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 199 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 141 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 123 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 69 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 95 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 129 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 147 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 136 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 75 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 143 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 174 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 100 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 137 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 160 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 141 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 145 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 116 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 94 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 145 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 166 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 211 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 217 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 234 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 174 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 240 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 202 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 209 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 180 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 233 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 179 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 240 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 147 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 240 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 153 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 95 bp overlap
ChIP liver ENCFF537QZV 240 bp overlap
ChIP liver ERP002306.FOXA1.liver 165 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 134 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 240 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 240 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 148 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 58 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 188 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 130 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 66 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 170 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 240 bp overlap
ChIP DE DE-FOXA2-2 240 bp overlap
ChIP liver ENCFF877SFI 192 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 174 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 119 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 240 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 184 bp overlap
GATA2 4 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 175 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 175 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 191 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 174 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 226 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 240 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 207 bp overlap
ChIP DE DE-GATA6-2 240 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 240 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 240 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 218 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 220 bp overlap
HOXB13 4 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 121 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 102 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 79 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 155 bp overlap
MED1 1 dataset
ChIP VCaP_DHT GSE125245.MED1.VCaP_DHT 157 bp overlap
MPHOSPH8 1 dataset
ChIP H9 GSE95374.MPHOSPH8.H9 240 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 171 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 78 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 240 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 61 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 99 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 240 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 206 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 226 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 52 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 195 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 207 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 112 bp overlap
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