chr1 : 214,553,439 214,553,655
216 bp 24 TFs 1 linked gene
This 216 bp open chromatin element is linked to PTPN14 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PTPN14 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:214,548,439 – 214,558,655
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 100 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 181 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 124 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 142 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 200 bp overlap
GATA2 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 167 bp overlap
GATA3 3 datasets
ChIP SK-N-SH ENCFF040SSB 216 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 216 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 115 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 216 bp overlap
ChIP DE DE-GATA4-2 216 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 216 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 216 bp overlap
ChIP DE DE-GATA6-2 216 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 216 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 216 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 216 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 216 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 216 bp overlap
ChIP foregut GSE117136.GATA6.foregut 216 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 216 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 215 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 216 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 215 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 169 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 216 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 174 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 163 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 174 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 130 bp overlap
RELA 1 dataset
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 124 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 216 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 216 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 216 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 216 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 216 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 216 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 216 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 213 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 168 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 134 bp overlap
SPIB 1 dataset
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 86 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 216 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 216 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 210 bp overlap
TFAP2C 1 dataset
ChIP WA09 GSE105081.TFAP2C.WA09 129 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 119 bp overlap