chr12 : 7,856,636 7,856,950
314 bp 30 TFs 1 linked gene
This 314 bp open chromatin element is linked to ENSG00000241828 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000241828 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:7,851,636 – 7,861,950
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP primary-dermal-fibroblasts_overexpressed GSE81403.ATF3.primary-dermal-fibroblasts_overexpressed 183 bp overlap
BRD4 3 datasets
ChIP SW480 GSE73319.BRD4.SW480 314 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 286 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 257 bp overlap
CDK8 1 dataset
ChIP SW480 GSE53602.CDK8.SW480 314 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 72 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 248 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 238 bp overlap
FOSL2 2 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 164 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 179 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 314 bp overlap
ChIP DE DE-FOXA2-2 314 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 314 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 314 bp overlap
GATA6 8 datasets
ChIP AGS GSE51705.GATA6.AGS 174 bp overlap
ChIP DE DE-GATA6-2 314 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 314 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 314 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 277 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 187 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 314 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 314 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 314 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 314 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 302 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 314 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 133 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 314 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 220 bp overlap
ONECUT2 1 dataset
ChIP PC-3_hypoxia GSE106305.ONECUT2.PC-3_hypoxia 129 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 314 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 314 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 222 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 285 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 314 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 314 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 314 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 314 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 314 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 314 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 269 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 314 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 146 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 248 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 188 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 138 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 94 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 291 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 251 bp overlap
TP53 2 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 314 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 313 bp overlap