Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

AR 13 datasets

ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 134 bp overlap

ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 165 bp overlap

ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 223 bp overlap

ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 114 bp overlap

ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 138 bp overlap

ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 107 bp overlap

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 173 bp overlap

ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 172 bp overlap

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 222 bp overlap

ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 162 bp overlap

ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 172 bp overlap

ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 341 bp overlap

ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 312 bp overlap

Ahr::Arnt 1 dataset

Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap

Arid3a 1 dataset

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DMRTA2 1 dataset

Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap

DPRX 1 dataset

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

DUX4 1 dataset

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 206 bp overlap

ESR1 1 dataset

ChIP ZR751 ERP000783.ESR1.ZR751 228 bp overlap

FOXA1 13 datasets

ChIP A1A3_Brg1KD_Dex GSE112491.FOXA1.A1A3_Brg1KD_Dex 320 bp overlap

ChIP A1A3_Brg1KD_EtOH GSE112491.FOXA1.A1A3_Brg1KD_EtOH 218 bp overlap

ChIP A1A3_Dex GSE112491.FOXA1.A1A3_Dex 187 bp overlap

ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 202 bp overlap

ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 265 bp overlap

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 255 bp overlap

ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 238 bp overlap

ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 202 bp overlap

ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 209 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 242 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 241 bp overlap

ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 226 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 275 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 438 bp overlap

ChIP DE DE-FOXA2-2 462 bp overlap

GATA1 1 dataset

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 142 bp overlap

GATA2 2 datasets

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 307 bp overlap

ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 232 bp overlap

GATA3 5 datasets

ChIP A1A3_Brg1KD_Dex GSE112491.GATA3.A1A3_Brg1KD_Dex 395 bp overlap

ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 327 bp overlap

ChIP A1A3_Dex GSE112491.GATA3.A1A3_Dex 271 bp overlap

ChIP MCF-7 GSE133072.GATA3.MCF-7 290 bp overlap

ChIP MCF-7 GSE122847.GATA3.MCF-7 193 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 322 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 424 bp overlap

ChIP DE DE-GATA4-2 462 bp overlap

ChIP foregut GSE117136.GATA4.foregut 462 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 323 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 357 bp overlap

ChIP DE DE-GATA6-2 455 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 411 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 381 bp overlap

ChIP foregut GSE117136.GATA6.foregut 411 bp overlap

GRHL2 1 dataset

Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

HAND2 1 dataset

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

HOXB13 1 dataset

ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 233 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NR3C1 2 datasets

ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 462 bp overlap

ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 222 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

PGR 2 datasets

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 371 bp overlap

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 155 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 382 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 257 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 178 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 244 bp overlap

STAT3 3 datasets

ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 272 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 187 bp overlap

ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 337 bp overlap

Spz1 1 dataset

Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap

TP63 1 dataset

ChIP foreskin GSE126390.TP63.foreskin 244 bp overlap

ZBTB32 1 dataset

Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap

ZNF274 1 dataset

Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap

Genome Browser