chr1 : 192,109,420 192,110,218
798 bp 39 TFs 0 linked genes
This 798 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:192,104,420 – 192,115,218
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 256 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 564 bp overlap
Dmrt1 1 dataset
Motif DE_36h DE_36h-Dmrt1_MA1603.2 9 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 131 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 397 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 574 bp overlap
ChIP DE DE-FOXA2-2 524 bp overlap
FOXN3 1 dataset
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
FOXP2 1 dataset
Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 640 bp overlap
ChIP DE DE-GATA4-2 555 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 590 bp overlap
ChIP DE DE-GATA6-2 638 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 452 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 455 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 337 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 485 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 466 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 477 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
NKX2-4 2 datasets
Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 2 datasets
Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-8_MA0673.2 8 bp overlap
Nr2e1 1 dataset
Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 434 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 352 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 301 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 397 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 575 bp overlap
SOX10 1 dataset
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 316 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 259 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 99 bp overlap
Sox11 1 dataset
Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap
Spz1 1 dataset
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
TEAD1 1 dataset
Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_36h DE_36h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_36h DE_36h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 170 bp overlap
ZIM3 2 datasets
Motif DE_36h DE_36h-ZIM3_MA1709.2 11 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 162 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 272 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 272 bp overlap
ZNF24 1 dataset
Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap
ZNF766 1 dataset
Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap
ZSCAN16 2 datasets
Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap