chr10 : 52,463,970 52,464,145
175 bp 21 TFs 1 linked gene
This 175 bp open chromatin element is linked to LNCAROD and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LNCAROD 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:52,458,970 – 52,469,145
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 171 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 175 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 175 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 151 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 150 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 86 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 175 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF250ODG 175 bp overlap
EGR1 1 dataset
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 153 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 103 bp overlap
MXD4 1 dataset
ChIP WTC11 ENCFF044PLT 153 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 175 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 76 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 175 bp overlap
PPARG 5 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 175 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 87 bp overlap
ChIP OE33 GSE143195.PPARG.OE33 175 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 175 bp overlap
ChIP THP-1_DIFF GSE25426.PPARG.THP-1_DIFF 175 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 175 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 175 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 175 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 151 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 175 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 175 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 175 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 175 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 175 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 175 bp overlap
ZNF730 1 dataset
ChIP HEK293T GSE78099.ZNF730.HEK293T 100 bp overlap