chr10 : 52,128,116 52,128,321
205 bp 29 TFs 1 linked gene
This 205 bp open chromatin element is linked to PRKG1 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PRKG1 23 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:52,123,116 – 52,133,321
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 187 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 134 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 205 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 205 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 205 bp overlap
CTCF 1 dataset
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 141 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 205 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 183 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 205 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 204 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 157 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 180 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 172 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 104 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 2 datasets
ChIP gastrocnemius medialis ENCFF081DTE 146 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 205 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 176 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 205 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 133 bp overlap
REST 1 dataset
ChIP H1 ENCFF429RUE 205 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 205 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 205 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 205 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 90 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 205 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 189 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF714 1 dataset
ChIP HEK293T GSE78099.ZNF714.HEK293T 205 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap