chr9 : 137,732,255 137,733,025
770 bp 20 TFs 7 linked genes
This 770 bp open chromatin element is linked to 7 target genes and is bound by 20 transcription factors.
Linked Genes
7 genes
Gene Expression Dist. to TSS Distance Link type
EHMT1 113.7 kb Distal Multiome
ARRDC1 127.0 kb Distal Multiome
ZMYND19 142.1 kb Distal Multiome
CACNA1B 145.1 kb Distal Multiome
DPH7 153.8 kb Distal Multiome
MRPL41 180.8 kb Distal Multiome
NSMF 273.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:137,727,255 – 137,738,025
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD4 5 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 60 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 106 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 61 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 141 bp overlap
ESR1 1 dataset
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 219 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 432 bp overlap
ChIP foregut GSE117136.GATA4.foregut 351 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 228 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 290 bp overlap
ChIP DE DE-GATA6-2 446 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 388 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 447 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 318 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 473 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 401 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 345 bp overlap
ChIP foregut GSE117136.GATA6.foregut 366 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 286 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 136 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 82 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 101 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 401 bp overlap
RBM22 3 datasets
ChIP K-562 GSE120104.RBM22.K-562 85 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 72 bp overlap
ChIP K562 ENCFF420JDS 206 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 332 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 338 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 529 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 495 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 550 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 361 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 373 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 462 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 440 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 406 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 269 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 238 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 87 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 208 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 276 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 336 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 253 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 223 bp overlap