chr9 : 117,785,100 117,785,297
197 bp 22 TFs 1 linked gene
This 197 bp open chromatin element is linked to ENSG00000284977 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000284977 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:117,780,100 – 117,790,297
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 80 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 197 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 197 bp overlap
CTCF 4 datasets
ChIP endodermal cell ENCFF471YCZ 197 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 197 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 197 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 197 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 190 bp overlap
ChIP DE DE-FOXA2-2 158 bp overlap
GATA3 1 dataset
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 197 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 144 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 120 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 197 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 157 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 197 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 175 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 197 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 151 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 118 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 197 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 197 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 197 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 161 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 120 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 197 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 197 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 197 bp overlap
RAD21 1 dataset
ChIP IMR-5 GSE78957.RAD21.IMR-5 186 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 157 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 197 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 197 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 197 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 197 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 156 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 107 bp overlap