chr1 : 179,447,635 – 179,447,778
143 bp 30 TFs 0 linked genes
This 143 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:179,442,635 – 179,452,778
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
CTCF 410 datasets
ChIP 22Rv1 ENCFF466OXN 143 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 143 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 143 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 143 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 143 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 143 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 143 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 99 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 132 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 143 bp overlap
ChIP A549 ENCFF034FVO 143 bp overlap
ChIP A549 ENCFF182TCQ 143 bp overlap
ChIP A549 ENCFF434LUY 143 bp overlap
ChIP A549 ENCFF669BWC 143 bp overlap
ChIP A673 ENCFF123WOM 143 bp overlap
ChIP AG04449 ENCFF248MBD 142 bp overlap
ChIP AG04450 ENCFF116DJL 143 bp overlap
ChIP AG09309 ENCFF478XPS 143 bp overlap
ChIP AG10803 ENCFF549AQK 143 bp overlap
ChIP B cell ENCFF506FKC 143 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 143 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 143 bp overlap
ChIP BE2C ENCFF757SRF 143 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 143 bp overlap
ChIP BJ ENCFF434HEC 143 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 138 bp overlap
ChIP BL41 GSE31485.CTCF.BL41 103 bp overlap
ChIP C4-2B ENCFF821XVN 143 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 143 bp overlap
ChIP Caco-2 ENCFF753NZV 143 bp overlap
ChIP Caco-2 ENCFF934QYS 143 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 117 bp overlap
ChIP Calu3 ENCFF526MDS 143 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 143 bp overlap
ChIP D721Med ENCFF513FYD 143 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND-41 ENCFF913MRA 143 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 143 bp overlap
ChIP DOHH2 ENCFF637WNW 90 bp overlap
ChIP DOHH2 ENCFF637WNW 143 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 143 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 143 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 143 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 143 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 143 bp overlap
ChIP GM06990 ENCFF471OQT 143 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 143 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 143 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 143 bp overlap
ChIP GM10248 ENCFF083HVS 136 bp overlap
ChIP GM10248 ENCFF226VLZ 133 bp overlap
ChIP GM10266 ENCFF241YYF 128 bp overlap
ChIP GM10266 ENCFF892KUY 128 bp overlap
ChIP GM12864 ENCFF357DQE 143 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 143 bp overlap
ChIP GM12865 ENCFF067GFI 143 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 130 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 143 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 122 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 114 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 107 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 143 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 118 bp overlap
ChIP GM12872 ENCFF697BYI 143 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 138 bp overlap
ChIP GM12873 ENCFF711LOS 143 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 143 bp overlap
ChIP GM12874 ENCFF942MTD 143 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 143 bp overlap
ChIP GM12875 ENCFF081UCQ 143 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 127 bp overlap
ChIP GM12878 ENCFF217EAX 143 bp overlap
ChIP GM12878 ENCFF485TGR 143 bp overlap
ChIP GM12878 ENCFF511URZ 143 bp overlap
ChIP GM12878 ENCFF635MMB 143 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 143 bp overlap
ChIP GM12878 ENCSR000AKB.CTCF.GM12878 143 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 101 bp overlap
ChIP GM13976 ENCFF896BYT 114 bp overlap
ChIP GM13977 ENCFF528ESQ 143 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 120 bp overlap
ChIP GM20000 ENCFF217HWJ 135 bp overlap
ChIP GM20000 ENCFF218HKS 135 bp overlap
ChIP GM23338 ENCFF531QOI 143 bp overlap
ChIP GM23338 ENCFF531QOI 92 bp overlap
ChIP GM23338 ENCFF772DML 133 bp overlap
ChIP GM23338 ENCFF832KWE 143 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 143 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 143 bp overlap
ChIP H1 ENCFF230QSV 104 bp overlap
ChIP H1 ENCFF414GZI 141 bp overlap
ChIP H1 ENCFF764RHO 85 bp overlap
ChIP H54 ENCFF255TVO 129 bp overlap
ChIP H9 ENCFF152GTF 143 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 143 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 143 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 143 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 143 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 143 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 143 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 143 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 143 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 143 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 143 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 143 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 97 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 143 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 143 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 143 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 143 bp overlap
ChIP HCT116 ENCFF003KHP 122 bp overlap
ChIP HCT116 ENCFF003KHP 103 bp overlap
ChIP HCT116 ENCFF209YMI 143 bp overlap
ChIP HCT116 ENCFF373YMA 143 bp overlap
ChIP HEK293 ENCFF498RMM 143 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 143 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 65 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 143 bp overlap
ChIP HFF-Myc ENCFF680WYR 143 bp overlap
ChIP HFFc6 ENCFF005CJI 143 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 143 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 114 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 143 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 143 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 143 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 143 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 143 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 143 bp overlap
ChIP HeLa-S3 ENCFF565UFR 128 bp overlap
ChIP HeLa-S3 ENCFF626XQK 143 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 143 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 143 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 118 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 106 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 120 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 143 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 143 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 143 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 143 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 143 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 104 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 120 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 143 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 143 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF127KUP 143 bp overlap
ChIP HepG2 ENCFF194VBQ 143 bp overlap
ChIP HepG2 ENCFF348BUL 143 bp overlap
ChIP HepG2 ENCFF668CTD 127 bp overlap
ChIP HepG2 ENCFF757EKU 143 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 131 bp overlap
ChIP IMR-90 ENCFF887MRH 133 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 105 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 143 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 62 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 143 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 124 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 143 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 133 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 117 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 130 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 143 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 133 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 143 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 143 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 143 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 140 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 143 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 143 bp overlap
ChIP K562 ENCFF082GOI 122 bp overlap
ChIP K562 ENCFF111MGE 143 bp overlap
ChIP K562 ENCFF400DFR 143 bp overlap
ChIP K562 ENCFF430KTH 143 bp overlap
ChIP K562 ENCFF430KTH 101 bp overlap
ChIP K562 ENCFF598YSU 143 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 143 bp overlap
ChIP KMS-11 ENCFF853JKX 143 bp overlap
ChIP KMS-11 ENCFF853JKX 143 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 143 bp overlap
ChIP LNCAP ENCFF223HIG 143 bp overlap
ChIP LNCAP ENCFF700QXT 143 bp overlap
ChIP LNCAP ENCFF700QXT 135 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 73 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 98 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 143 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 117 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 117 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 143 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 143 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 143 bp overlap
ChIP Loucy ENCFF359TVQ 143 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 143 bp overlap
ChIP MCF 10A ENCFF988BGF 143 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 143 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 143 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 143 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 143 bp overlap
ChIP MCF-7 ENCFF139NQI 96 bp overlap
ChIP MCF-7 ENCFF162GNE 97 bp overlap
ChIP MCF-7 ENCFF198DQX 142 bp overlap
ChIP MCF-7 ENCFF210JUZ 143 bp overlap
ChIP MCF-7 ENCFF414SZG 62 bp overlap
ChIP MCF-7 ENCFF424NQR 135 bp overlap
ChIP MCF-7 ENCFF494VXA 143 bp overlap
ChIP MCF-7 ENCFF844STM 134 bp overlap
ChIP MCF-7 ENCFF954TUV 59 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 118 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 143 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 143 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 143 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 143 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 143 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 143 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 143 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 143 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 143 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 143 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 111 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 103 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 143 bp overlap
ChIP MIA-PaCa-2 GSE88734.CTCF.MIA-PaCa-2 143 bp overlap
ChIP MM.1S ENCFF869JMQ 143 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 143 bp overlap
ChIP NB4 ENCFF155DNY 143 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 123 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 96 bp overlap
ChIP NCI-H929 ENCFF305JAB 143 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 143 bp overlap
ChIP OCI-LY1 ENCFF455ESK 128 bp overlap
ChIP OCI-LY1 ENCFF455ESK 98 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 140 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 143 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 136 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 143 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 143 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 143 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 143 bp overlap
ChIP PC-3 ENCFF487TUI 143 bp overlap
ChIP PC-3 ENCFF487TUI 138 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 143 bp overlap
ChIP PC-9 ENCFF539ULB 143 bp overlap
ChIP PC-9 ENCFF539ULB 136 bp overlap
ChIP Panc1 ENCFF056JQX 143 bp overlap
ChIP Peyer's patch ENCFF701KWW 143 bp overlap
ChIP Peyer's patch ENCFF742AQK 143 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 143 bp overlap
ChIP RWPE2 ENCFF911IEE 143 bp overlap
ChIP RWPE2 ENCFF911IEE 143 bp overlap
ChIP SEM GSE117864.CTCF.SEM 143 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 143 bp overlap
ChIP SK-N-SH ENCFF575DMG 143 bp overlap
ChIP SK-N-SH ENCFF731NJX 143 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 143 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 143 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 105 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 115 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 143 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 143 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 143 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 143 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 107 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 143 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 119 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 119 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 143 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 143 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 143 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 134 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 126 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 136 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 143 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 143 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 134 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 143 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 143 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 143 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 143 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 143 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 143 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 143 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 143 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 143 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 115 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 143 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 143 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 143 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 143 bp overlap
ChIP VCaP ENCFF858YQT 143 bp overlap
ChIP VU-SCC-147 GSE143026.CTCF.VU-SCC-147 112 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 123 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 62 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 143 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 143 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 143 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 143 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 143 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 143 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 143 bp overlap
ChIP ascending aorta ENCFF451CCT 143 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 130 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 131 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 125 bp overlap
ChIP brain ENCFF685VRG 143 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 143 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 143 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 143 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 79 bp overlap
ChIP chondrocyte ENCFF134ORZ 143 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 143 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 140 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 143 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 143 bp overlap
ChIP endodermal cell ENCFF471YCZ 143 bp overlap
ChIP endothelial cell ENCFF663LIE 143 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 143 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 143 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 143 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 143 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 134 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 143 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 143 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 143 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 143 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 143 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 124 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 143 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 127 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 118 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 143 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 138 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 143 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 143 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 143 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 137 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 143 bp overlap
ChIP fibroblast of lung ENCFF084DUH 143 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 143 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 143 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 143 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 143 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 143 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 130 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 125 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 105 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 109 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 143 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 97 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 143 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 143 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 143 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 143 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 143 bp overlap
ChIP heart left ventricle ENCFF505HGD 143 bp overlap
ChIP heart right ventricle ENCFF767XJQ 143 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 143 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 103 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 143 bp overlap
ChIP keratinocyte ENCFF046PBT 128 bp overlap
ChIP keratinocyte ENCFF291YDC 124 bp overlap
ChIP keratinocyte ENCFF667ULX 143 bp overlap
ChIP keratinocyte ENCFF805QIE 143 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 143 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 143 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 143 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 111 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 143 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 143 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 143 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 143 bp overlap
ChIP liver ENCFF895ERR 143 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 143 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 143 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 103 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 143 bp overlap
ChIP myotube ENCFF981UHL 143 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 143 bp overlap
ChIP neural crest cell ENCFF182LWK 91 bp overlap
ChIP neural progenitor cell ENCFF420RBO 143 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 143 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 101 bp overlap
ChIP osteoblast ENCFF491ZJZ 143 bp overlap
ChIP osteoblast ENCFF491ZJZ 99 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 143 bp overlap
ChIP osteocyte ENCFF929FPD 143 bp overlap
ChIP placenta ENCFF029PHY 143 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 142 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 143 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 119 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 108 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 143 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 143 bp overlap
ChIP right lobe of liver ENCFF011NDG 143 bp overlap
ChIP right lobe of liver ENCFF250KSY 143 bp overlap
ChIP right lobe of liver ENCFF523SCB 143 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 143 bp overlap
ChIP smooth muscle cell ENCFF656FBT 143 bp overlap
ChIP thyroid gland ENCFF300RYK 143 bp overlap
ChIP transverse colon ENCFF653EYS 143 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 143 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 143 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 143 bp overlap
CTCFL 3 datasets
ChIP K-562 ENCSR000BNK.CTCFL.K-562 98 bp overlap
ChIP K562 ENCFF883NXC 137 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 111 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
ESR1 17 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 143 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 95 bp overlap
ChIP MCF-7_E2-160min-ERalpha GSE94023.ESR1.MCF-7_E2-160min-ERalpha 56 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 64 bp overlap
ChIP MCF-7_E2-320min-ERalpha GSE94023.ESR1.MCF-7_E2-320min-ERalpha 52 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 96 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 143 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 143 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 143 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 143 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 143 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 143 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 143 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 143 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 143 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 143 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 143 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GRHL1 2 datasets
ChIP MCF-7 GSE140185.GRHL1.MCF-7 96 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.GRHL1.MCF-7_ARID1A-KO 123 bp overlap
GRHL2 4 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 143 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 143 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 143 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 133 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 143 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 131 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
RAD21 24 datasets
ChIP A549 ENCFF047SFC 143 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 143 bp overlap
ChIP H1 ENCFF698EWO 75 bp overlap
ChIP H1 ENCFF967OJF 143 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 143 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 104 bp overlap
ChIP HCT116 ENCFF568PEO 143 bp overlap
ChIP HeLa-S3 ENCFF775CHI 143 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 102 bp overlap
ChIP HepG2 ENCFF360ZSW 143 bp overlap
ChIP HepG2 ENCFF906QIS 143 bp overlap
ChIP HepG2 ENCFF963UBJ 143 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 86 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 91 bp overlap
ChIP K562 ENCFF634XYR 143 bp overlap
ChIP MCF-7 ENCFF694KOM 143 bp overlap
ChIP MCF-7 ENCFF724VCQ 143 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 124 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 128 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 125 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 123 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 130 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 143 bp overlap
ChIP liver ENCFF522JHE 143 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 143 bp overlap
SMC1A 4 datasets
ChIP A-549 GSE76893.SMC1A.A-549 114 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 106 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 94 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 143 bp overlap
SMC3 5 datasets
ChIP GP5D GSE51234.SMC3.GP5D 114 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 143 bp overlap
ChIP HeLa-S3 ENCFF992MML 143 bp overlap
ChIP HepG2 ENCFF745UAV 143 bp overlap
ChIP IMR-90 ENCFF627LON 143 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
STAG1 4 datasets
ChIP HepG2 ENCFF843EBZ 143 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 125 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 109 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 104 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 121 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 121 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 105 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Huangfu Lab · Publications · Resources · Contact