Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

AR 8 datasets

ChIP VCaP GSE148358.AR.VCaP 70 bp overlap

ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 50 bp overlap

ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 98 bp overlap

ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 105 bp overlap

ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 87 bp overlap

ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 119 bp overlap

ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 56 bp overlap

ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 125 bp overlap

ARID1A 1 dataset

ChIP NGP GSE134626.ARID1A.NGP 431 bp overlap

BRD4 5 datasets

ChIP BE2C GSE80151.BRD4.BE2C 314 bp overlap

ChIP CHL-1 GSE95585.BRD4.CHL-1 229 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 195 bp overlap

ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 314 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 431 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 174 bp overlap

CLOCK 1 dataset

ChIP BA40_0 GSE96659.CLOCK.BA40_0 151 bp overlap

CTNNB1 2 datasets

ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 177 bp overlap

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 249 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

ERG 1 dataset

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 115 bp overlap

ETV6 1 dataset

Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap

ETV7 1 dataset

Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

GATA3 5 datasets

ChIP BE2C GSE65664.GATA3.BE2C 173 bp overlap

ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 208 bp overlap

ChIP Kelly GSE65664.GATA3.Kelly 174 bp overlap

ChIP NGP GSE65664.GATA3.NGP 192 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 293 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 307 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 255 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 418 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 418 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 431 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 431 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 431 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 431 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 302 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 431 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 431 bp overlap

MYCN 3 datasets

ChIP BE2C GSE80151.MYCN.BE2C 278 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 194 bp overlap

ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 278 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 431 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 125 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 431 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 325 bp overlap

NIPBL 2 datasets

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 249 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 390 bp overlap

PHOX2B 1 dataset

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 172 bp overlap

RAD21 1 dataset

ChIP IMR-5 GSE78957.RAD21.IMR-5 145 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 379 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 431 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 362 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 348 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 411 bp overlap

SMARCA4 6 datasets

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 346 bp overlap

ChIP NGP GSE134626.SMARCA4.NGP 431 bp overlap

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 431 bp overlap

ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 126 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 384 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 326 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 229 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 182 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 176 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TP53 1 dataset

ChIP H9 GSE142050.TP53.H9 351 bp overlap

ZNF175 1 dataset

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

ZNF274 1 dataset

Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap

Genome Browser