chr9 : 42,974,799 42,975,083
284 bp 26 TFs 3 linked genes
This 284 bp open chromatin element is linked to ENSG00000276128, ENSG00000293321, and CNN2P4 and is bound by 26 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000276128 at TSS At TSS Proximity
ENSG00000293321 at TSS At TSS Proximity
CNN2P4 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:42,969,799 – 42,980,083
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 143 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 284 bp overlap
ChIP SKNO-1 GSE23730.CBFB.SKNO-1 156 bp overlap
CTCF 20 datasets
ChIP GM23338 ENCFF531QOI 268 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H9 ENCFF152GTF 225 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 239 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP brain ENCFF685VRG 284 bp overlap
ChIP endodermal cell ENCFF471YCZ 269 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 284 bp overlap
ChIP heart right ventricle ENCFF022KFI 260 bp overlap
ChIP hepatocyte ENCFF263BLJ 197 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 241 bp overlap
ChIP neural crest cell ENCFF182LWK 160 bp overlap
ChIP neural crest cell ENCFF182LWK 241 bp overlap
ChIP neural progenitor cell ENCFF420RBO 119 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 97 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 195 bp overlap
ChIP right lobe of liver ENCFF011NDG 268 bp overlap
ChIP smooth muscle cell ENCFF656FBT 186 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 176 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 284 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 276 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
E2F8 2 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
ERG 4 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 203 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 284 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 220 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 245 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 204 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 167 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 284 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 245 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 248 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 284 bp overlap
RUNX1 3 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 229 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 229 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 260 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 281 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 201 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap