chr1 : 176,779,764 176,780,598
834 bp 47 TFs 0 linked genes
This 834 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:176,774,764 – 176,785,598
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 53 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 197 bp overlap
CTCF 5 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 221 bp overlap
ChIP body of pancreas ENCFF881RGF 281 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 246 bp overlap
ChIP stomach ENCFF370OWL 417 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
EBF1 1 dataset
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 217 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 209 bp overlap
ETV1 1 dataset
ChIP LNCaP GSE47120.ETV1.LNCaP 59 bp overlap
Ebf4 1 dataset
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 127 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 404 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 540 bp overlap
ChIP DE DE-FOXA2-2 558 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 433 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 607 bp overlap
ChIP DE DE-GATA4-2 591 bp overlap
ChIP ESO-26 GSE132813.GATA4.ESO-26 292 bp overlap
ChIP foregut GSE117136.GATA4.foregut 561 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 570 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 544 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 204 bp overlap
ChIP DE DE-GATA6-1 472 bp overlap
ChIP DE DE-GATA6-2 614 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 326 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 275 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 425 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 339 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 433 bp overlap
ChIP foregut GSE117136.GATA6.foregut 562 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 562 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 442 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 544 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 422 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 333 bp overlap
Lhx3 1 dataset
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
MGA 1 dataset
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 88 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 210 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 199 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 345 bp overlap
POLR2A 2 datasets
ChIP stomach ENCFF607ZPU 91 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
POU3F2 1 dataset
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REST 5 datasets
ChIP H1 ENCFF429RUE 161 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 124 bp overlap
ChIP LNCaP GSE119385.REST.LNCaP 147 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 100 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 169 bp overlap
RREB1 1 dataset
Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 291 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 164 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 270 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 276 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 202 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBX1 1 dataset
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 224 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 159 bp overlap
ZSCAN4 1 dataset
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap