chr9 : 26,210,377 – 26,210,763

386 bp 54 TFs 0 linked genes

This 386 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

54 transcription factors

ARGFX 1 dataset

Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap

ARNTL 2 datasets

ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 128 bp overlap

ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 306 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BRD2 1 dataset

ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 330 bp overlap

BRD4 7 datasets

ChIP CHL-1 GSE95585.BRD4.CHL-1 386 bp overlap

ChIP Hs-352-Sk GSE83725.BRD4.Hs-352-Sk 230 bp overlap

ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 386 bp overlap

ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 386 bp overlap

ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 386 bp overlap

ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 343 bp overlap

ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 386 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CDK9 1 dataset

ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 159 bp overlap

CTCF 1 dataset

ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 209 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

EBF1 1 dataset

ChIP ASC GSE54889.EBF1.ASC 131 bp overlap

GATA1 1 dataset

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 86 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 262 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

IRF4 3 datasets

ChIP NCI-H929 GSE142493.IRF4.NCI-H929 87 bp overlap

ChIP NCI-H929 GSE56857.IRF4.NCI-H929 87 bp overlap

ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 145 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 327 bp overlap

MED1 4 datasets

ChIP U-87MG GSE36354.MED1.U-87MG 386 bp overlap

ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 201 bp overlap

ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 184 bp overlap

ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 355 bp overlap

MEIS1 1 dataset

ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 188 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NHLH2 1 dataset

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 293 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

OLIG2 1 dataset

ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 254 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 98 bp overlap

PPARG 1 dataset

Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 276 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 237 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 292 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SPI1 1 dataset

ChIP NCI-H929 GSE56857.SPI1.NCI-H929 105 bp overlap

SS18-SSX 1 dataset

ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 349 bp overlap

STAG2 1 dataset

ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 109 bp overlap

TAL1 1 dataset

ChIP CHRF28811 ERP008568.TAL1.CHRF28811 158 bp overlap

USF1 3 datasets

ChIP H1 ENCFF090WVU 205 bp overlap

ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 151 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 181 bp overlap

USF2 2 datasets

ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 159 bp overlap

ChIP WTC11 ENCFF139JAW 281 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZNF143 1 dataset

ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap

ZNF8 1 dataset

Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap

Zic1::Zic2 2 datasets

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 2 datasets

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap