chr8 : 54,464,038 54,464,280
242 bp 26 TFs 2 linked genes
This 242 bp open chromatin element is linked to ENSG00000274310 and SOX17 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000274310 2.9 kb Proximal Proximity
SOX17 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:54,459,038 – 54,469,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 162 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 160 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 230 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 112 bp overlap
ESR1 3 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 66 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 66 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 147 bp overlap
EZH2 12 datasets
ChIP GM23338 ENCFF613YON 80 bp overlap
ChIP H1 ENCFF232NZA 242 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 242 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 162 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 242 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 242 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 242 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 242 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 201 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 242 bp overlap
ChIP neural progenitor cell ENCFF018MKA 242 bp overlap
ChIP neural progenitor cell ENCFF472NFV 242 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 180 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 70 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 134 bp overlap
JARID2 7 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 242 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 173 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 242 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 217 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 242 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 193 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 242 bp overlap
KDM3A 1 dataset
ChIP 22Rv1_shKDM3A GSE109748.KDM3A.22Rv1_shKDM3A 92 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 190 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 133 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 242 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 70 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 241 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 242 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 242 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 155 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 242 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 132 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 93 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 197 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 196 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 242 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 242 bp overlap
ChIP H1 ENCFF881NFR 242 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 150 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 220 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 141 bp overlap