chr8 : 54,201,572 54,203,125
1,553 bp 26 TFs 1 linked gene
This 1.6 kb open chromatin element is linked to ENSG00000270980 and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000270980 9.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:54,196,572 – 54,208,125
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 387 bp overlap
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 198 bp overlap
ChIP LNCaP GSE80256.AR.LNCaP 418 bp overlap
BRD3 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 105 bp overlap
BRD4 4 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 205 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 327 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 182 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
CTCF 2 datasets
ChIP U-937 ERP008568.CTCF.U-937 593 bp overlap
ChIP endodermal cell ENCFF471YCZ 433 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 230 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 506 bp overlap
ChIP BLaER1 ENCFF274GAT 251 bp overlap
ChIP BLaER1 ENCFF896HSY 162 bp overlap
DEAF1 1 dataset
ChIP keratinocyte GSE129965.DEAF1.keratinocyte 192 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 265 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 69 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 228 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 295 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 76 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 363 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 291 bp overlap
KDM4C 2 datasets
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 188 bp overlap
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 279 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 599 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 284 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 262 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 222 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 259 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 170 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 262 bp overlap
ZBTB7A 2 datasets
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 281 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 289 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 108 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 91 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 171 bp overlap