chr7 : 6,346,414 6,346,983
569 bp 30 TFs 2 linked genes
This 569 bp open chromatin element is linked to FAM220A and SAGSIN1 and is bound by 30 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FAM220A 2.0 kb Proximal Proximity
SAGSIN1 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:6,341,414 – 6,351,983
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE63202.AR.LNCaP 214 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 196 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 133 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
BRD4 3 datasets
ChIP 402-91 GSE111253.BRD4.402-91 279 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 249 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 211 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 150 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 85 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 203 bp overlap
CTCF 5 datasets
ChIP GM23338 ENCFF531QOI 78 bp overlap
ChIP H9 ENCFF152GTF 75 bp overlap
ChIP HFFc6 ENCFF005CJI 192 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 71 bp overlap
ChIP endodermal cell ENCFF471YCZ 298 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 104 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 195 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCFF364ZWT 417 bp overlap
ESR1 17 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 175 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 235 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 292 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 228 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 569 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 453 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 453 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 271 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 569 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 498 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 382 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 469 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 369 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 424 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 566 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 482 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 183 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 181 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 217 bp overlap
MITF 6 datasets
ChIP 501-mel GSE137522.MITF.501-mel 128 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 186 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 100 bp overlap
ChIP 501-mel_K243R GSE137522.MITF.501-mel_K243R 123 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 88 bp overlap
ChIP K562 ENCFF731XJJ 130 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-HUSH-KO GSE95451.MORC2.HeLa_V5-HUSH-KO 175 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 252 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 262 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 171 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 405 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 181 bp overlap
ChIP 786-O GSE86092.RELA.786-O 234 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 264 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 202 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 57 bp overlap
USF1 1 dataset
ChIP H1 ENCFF090WVU 53 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 151 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 232 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 178 bp overlap