chr6 : 140,806,549 140,806,845
296 bp 52 TFs 0 linked genes
This 296 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:140,801,549 – 140,811,845
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP 12Z GSE129781.ARID1A.12Z 277 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 241 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 286 bp overlap
Alx4 1 dataset
Motif DE_48h DE_48h-Alx4_MA0853.2 12 bp overlap
Arid3b 1 dataset
Motif DE_48h DE_48h-Arid3b_MA0601.2 7 bp overlap
Arx 1 dataset
Motif DE_48h DE_48h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 272 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 272 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 211 bp overlap
BSX 1 dataset
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
DLX1 1 dataset
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
EN2 1 dataset
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 204 bp overlap
FOS 2 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 228 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 185 bp overlap
FOSL2 2 datasets
ChIP NPC GSE122631.FOSL2.NPC 198 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 157 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 296 bp overlap
ChIP DE DE-FOXA2-2 296 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 296 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 296 bp overlap
GBX1 1 dataset
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 140 bp overlap
HESX1 1 dataset
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
Hmx1 1 dataset
Motif DE_48h DE_48h-Hmx1_MA0896.2 9 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 253 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 296 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 268 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 184 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 161 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 173 bp overlap
LBX1 1 dataset
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
ChIP retina_pigment GSE60024.LHX2.retina_pigment 296 bp overlap
LHX9 1 dataset
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 216 bp overlap
MSX1 1 dataset
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
NFATC3 1 dataset
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 138 bp overlap
Nfatc1 1 dataset
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Nobox 1 dataset
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
PRRX2 1 dataset
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 248 bp overlap
RAX 1 dataset
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 296 bp overlap
SMARCA4 2 datasets
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 296 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 256 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 285 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 295 bp overlap
SOX4 1 dataset
ChIP MDA-MB-231 GSE104760.SOX4.MDA-MB-231 200 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 170 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 167 bp overlap
TEAD4 4 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 136 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 201 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 110 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 114 bp overlap
ZNF35 1 dataset
Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap