chr6 : 26,131,707 – 26,131,947
240 bp 37 TFs 3 linked genes
This 240 bp open chromatin element is linked to H2AC6, H2BC4, and ENSG00000291336 and is bound by 37 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
H2AC6 7.5 kb Proximal Proximity
H2BC4 7.8 kb Proximal Proximity
ENSG00000291336 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:26,126,707 – 26,136,947
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 31 datasets
ChIP LNCaP GSE110655.AR.LNCaP 116 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 126 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 142 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 122 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 104 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 197 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 209 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 145 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 101 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 78 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 139 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 157 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 143 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 157 bp overlap
ChIP LNCaP_R1881_HOTAIR GSE61268.AR.LNCaP_R1881_HOTAIR 86 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 155 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 155 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 203 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 148 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 99 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 204 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 161 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 164 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 115 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 131 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 178 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 233 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 152 bp overlap
ChIP prostate GSE56288.AR.prostate 60 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 153 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 85 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 112 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 146 bp overlap
BCLAF1 2 datasets
ChIP K-562 ENCSR000BKH.BCLAF1.K-562 240 bp overlap
ChIP K562 ENCFF936NCS 240 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 90 bp overlap
CGGBP1 1 dataset
ChIP K562 ENCFF412PRC 165 bp overlap
CHD2 1 dataset
ChIP K562 ENCFF857WME 204 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF200OMJ 64 bp overlap
FIP1L1 2 datasets
ChIP K562 ENCFF002WKI 199 bp overlap
ChIP K562 ENCFF363ZMN 209 bp overlap
FOXA1 10 datasets
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 138 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 120 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 60 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 143 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 140 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 51 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 125 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 148 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 131 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 89 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 240 bp overlap
ChIP DE DE-FOXA2-2 240 bp overlap
GATA2 7 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 170 bp overlap
ChIP K562 ENCFF830LLA 240 bp overlap
ChIP K562 ENCFF830LLA 201 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 156 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 158 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 146 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 240 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 240 bp overlap
ChIP DE DE-GATA4-2 240 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 240 bp overlap
ChIP DE DE-GATA6-2 240 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 240 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 240 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 111 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 236 bp overlap
HOXB13 2 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 61 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 54 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 54 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 223 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 173 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 240 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 184 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 240 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 152 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 240 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 240 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 160 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 168 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 153 bp overlap
POLR2A 7 datasets
ChIP GM12878 ENCFF631ERR 154 bp overlap
ChIP H1 ENCFF566JSR 141 bp overlap
ChIP K562 ENCFF215CWW 240 bp overlap
ChIP K562 ENCFF262YXJ 240 bp overlap
ChIP K562 ENCFF514URW 240 bp overlap
ChIP K562 ENCFF643HGX 240 bp overlap
ChIP K562 ENCFF643HGX 128 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 75 bp overlap
ChIP K562 ENCFF648YPL 75 bp overlap
RBFOX2 6 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 240 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 240 bp overlap
ChIP K562 ENCFF196WTG 74 bp overlap
ChIP K562 ENCFF196WTG 211 bp overlap
ChIP K562 ENCFF967GRF 151 bp overlap
ChIP K562 ENCFF967GRF 240 bp overlap
SMAD5 1 dataset
ChIP K562 ENCFF941FJJ 204 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 122 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 203 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 240 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 179 bp overlap
SUPT5H 1 dataset
ChIP K562 ENCFF902PAW 240 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 240 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 166 bp overlap
THRAP3 1 dataset
ChIP K-562 ENCSR871TKJ.THRAP3.K-562 127 bp overlap
TRIM25 1 dataset
ChIP K562 ENCFF376TLP 102 bp overlap
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