chr5 : 167,570,564 167,570,897
333 bp 27 TFs 1 linked gene
This 333 bp open chromatin element is linked to TENM2 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TENM2 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:167,565,564 – 167,575,897
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 203 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 220 bp overlap
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 202 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 142 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
DPF2 3 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 173 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 224 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 77 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 333 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 150 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 192 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 4 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 91 bp overlap
ChIP KB GSE52469.RELA.KB 103 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 323 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 333 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 203 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 192 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 72 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 205 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 287 bp overlap
SMARCC1 2 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 128 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 50 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 176 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 231 bp overlap
TEAD1 3 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 333 bp overlap
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 149 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 285 bp overlap
ChIP H1 ENCFF778PAX 82 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 139 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 204 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 133 bp overlap