chr5 : 154,677,990 154,678,253
263 bp 30 TFs 1 linked gene
This 263 bp open chromatin element is linked to LARP1 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LARP1 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:154,672,990 – 154,683,253
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP K-562_JQ1_2h GSE99178.BRD4.K-562_JQ1_2h 135 bp overlap
CEBPA 1 dataset
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 152 bp overlap
CEBPB 6 datasets
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 153 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 186 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 175 bp overlap
ChIP K562 ENCFF194QGF 225 bp overlap
ChIP K562 ENCFF584CTB 263 bp overlap
ChIP K562 ENCFF584CTB 240 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 193 bp overlap
EHF 1 dataset
ChIP primary-bronchial-epithelial GSE85401.EHF.primary-bronchial-epithelial 144 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 263 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 263 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 263 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 127 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 263 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 146 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 222 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 263 bp overlap
ChIP DE DE-GATA6-2 263 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 227 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 190 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 192 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 204 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 193 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 198 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 239 bp overlap
MEF2A 1 dataset
ChIP K562 ENCFF903PRO 138 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 167 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 263 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 218 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 108 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 166 bp overlap
POLR2A 2 datasets
ChIP esophagus muscularis mucosa ENCFF759BBR 263 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 263 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 263 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 113 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 155 bp overlap
SPI1 2 datasets
ChIP K-562 GSE70482.SPI1.K-562 195 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 142 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 177 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 217 bp overlap