chr5 : 146,706,338 – 146,706,560
222 bp 22 TFs 1 linked gene
This 222 bp open chromatin element is linked to KRT8P48 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
KRT8P48 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:146,701,338 – 146,711,560
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 186 bp overlap
CTCF 182 datasets
ChIP 22Rv1 ENCFF466OXN 222 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 222 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 222 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 222 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 180 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 209 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 121 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 222 bp overlap
ChIP A549 ENCFF034FVO 222 bp overlap
ChIP A549 ENCFF182TCQ 209 bp overlap
ChIP A673 ENCFF123WOM 204 bp overlap
ChIP BE2C ENCFF757SRF 222 bp overlap
ChIP C4-2B ENCFF821XVN 222 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 211 bp overlap
ChIP DND-41 ENCFF913MRA 130 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 181 bp overlap
ChIP DOHH2 ENCFF637WNW 222 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 222 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 222 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 216 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 204 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 198 bp overlap
ChIP GM06990 ENCFF471OQT 222 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 200 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 220 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 222 bp overlap
ChIP GM12864 ENCFF357DQE 209 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 181 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 150 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 139 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 142 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 136 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 207 bp overlap
ChIP GM12873 ENCFF711LOS 222 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 137 bp overlap
ChIP GM12874 ENCFF942MTD 222 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 122 bp overlap
ChIP GM12875 ENCFF081UCQ 222 bp overlap
ChIP GM12878 ENCFF485TGR 210 bp overlap
ChIP GM12878 ENCFF511URZ 182 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 152 bp overlap
ChIP GM23338 ENCFF531QOI 222 bp overlap
ChIP GM23338 ENCFF772DML 177 bp overlap
ChIP GM23338 ENCFF832KWE 222 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 222 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 210 bp overlap
ChIP H1 ENCFF764RHO 182 bp overlap
ChIP H54 ENCFF255TVO 217 bp overlap
ChIP H9 ENCFF152GTF 222 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 222 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 218 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 198 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 217 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 179 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 205 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 222 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 222 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 184 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 222 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 222 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 169 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 145 bp overlap
ChIP HCT116 ENCFF003KHP 222 bp overlap
ChIP HCT116 ENCFF209YMI 222 bp overlap
ChIP HEK293 ENCFF498RMM 222 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 222 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 193 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 119 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 222 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 163 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 163 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 222 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 176 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 222 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 172 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 201 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 148 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 134 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 177 bp overlap
ChIP HepG2 ENCFF127KUP 212 bp overlap
ChIP HepG2 ENCFF194VBQ 222 bp overlap
ChIP HepG2 ENCFF348BUL 193 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 222 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 170 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 168 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 176 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 149 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 121 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 127 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 138 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 143 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 121 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 134 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 142 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 130 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 139 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 133 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 168 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 152 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF598YSU 222 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 186 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 128 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 156 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 222 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 222 bp overlap
ChIP MCF-7 ENCFF139NQI 222 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 190 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 222 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 175 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 138 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 222 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 222 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 222 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 222 bp overlap
ChIP NB4 ENCFF155DNY 222 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 217 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 116 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 222 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 203 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 222 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 133 bp overlap
ChIP PC-3 ENCFF487TUI 163 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 222 bp overlap
ChIP Panc1 ENCFF056JQX 222 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 146 bp overlap
ChIP SK-N-SH ENCFF575DMG 222 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 222 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 154 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 222 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 222 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 174 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 222 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 163 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 203 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 163 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 211 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 140 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 143 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 178 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 211 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 211 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 222 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 222 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 120 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 216 bp overlap
ChIP chondrocyte ENCFF134ORZ 222 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 198 bp overlap
ChIP endodermal cell ENCFF471YCZ 222 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 205 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 176 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 222 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 222 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 206 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 153 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 218 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 141 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 144 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 183 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 158 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 201 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 206 bp overlap
ChIP keratinocyte ENCFF667ULX 222 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 200 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 212 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 188 bp overlap
ChIP neural progenitor cell ENCFF420RBO 222 bp overlap
ChIP neural progenitor cell ENCFF581WPG 222 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 170 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 136 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 155 bp overlap
ChIP right lobe of liver ENCFF011NDG 222 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 222 bp overlap
EZH2 2 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 116 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 87 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 135 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 222 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 56 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 186 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 117 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 222 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 108 bp overlap
ChIP H1 ENCFF967OJF 208 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 131 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 127 bp overlap
ChIP HepG2 ENCFF360ZSW 212 bp overlap
ChIP HepG2 ENCFF906QIS 207 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 179 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 86 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 222 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 159 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 206 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 183 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF843EBZ 222 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 171 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 183 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 156 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 190 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 119 bp overlap
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