chr5 : 122,846,985 122,847,120
135 bp 31 TFs 1 linked gene
This 135 bp open chromatin element is linked to SNX24 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SNX24 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:122,841,985 – 122,852,120
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 135 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 113 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 125 bp overlap
BACH2 1 dataset
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 92 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 118 bp overlap
ESR1 45 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 135 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 135 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 135 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 135 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 119 bp overlap
ChIP MCF-7 GSE119702.ESR1.MCF-7 115 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 113 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 118 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 126 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 135 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 135 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 135 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 135 bp overlap
ChIP MCF-7_E2 GSE119702.ESR1.MCF-7_E2 115 bp overlap
ChIP MCF-7_E2+4OHT GSE119702.ESR1.MCF-7_E2+4OHT 135 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 135 bp overlap
ChIP MCF-7_E2_45min GSE109820.ESR1.MCF-7_E2_45min 122 bp overlap
ChIP MCF-7_EtOH GSE136673.ESR1.MCF-7_EtOH 135 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 135 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 135 bp overlap
ChIP MCF-7_ICI GSE125594.ESR1.MCF-7_ICI 135 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 135 bp overlap
ChIP MCF-7_OBHS GSE133941.ESR1.MCF-7_OBHS 135 bp overlap
ChIP MCF-7_OHT GSE119702.ESR1.MCF-7_OHT 135 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 135 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 135 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 135 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 135 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 113 bp overlap
ChIP MCF-7_estrogen GSE133941.ESR1.MCF-7_estrogen 135 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 135 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 135 bp overlap
ChIP MCF-7_shCtrl GSE125594.ESR1.MCF-7_shCtrl 135 bp overlap
ChIP MCF-7_shFbxo_E2_4OHT GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT 135 bp overlap
ChIP MCF-7_shFbxo_OHT GSE119702.ESR1.MCF-7_shFbxo_OHT 135 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 135 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 135 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 135 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 135 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 135 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 135 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 119 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 135 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 135 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 135 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 135 bp overlap
FOXA1 24 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 135 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 135 bp overlap
ChIP MCF-7 GSE128445.FOXA1.MCF-7 135 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 102 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 58 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 135 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 128 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 68 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 135 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 135 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 115 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 128 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 135 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 99 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 97 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 53 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 135 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 135 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 135 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 135 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 135 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 135 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 135 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 135 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 135 bp overlap
ChIP DE DE-FOXA2-2 135 bp overlap
GATA2 1 dataset
ChIP WA09 GSE105081.GATA2.WA09 100 bp overlap
GATA3 8 datasets
ChIP MCF-7 GSE51274.GATA3.MCF-7 135 bp overlap
ChIP MCF-7 GSE117492.GATA3.MCF-7 135 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 135 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 135 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 135 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 133 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 90 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 135 bp overlap
GATA3_Cter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Cter.T-47D_CR3flp 135 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Cter.T-47D_flp-ctrl 135 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 135 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 135 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 135 bp overlap
ChIP DE DE-GATA4-2 135 bp overlap
ChIP foregut GSE117136.GATA4.foregut 135 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 135 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 135 bp overlap
ChIP DE DE-GATA6-2 135 bp overlap
ChIP foregut GSE117136.GATA6.foregut 135 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 135 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 135 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 110 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 109 bp overlap
NR3C1 2 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 135 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 135 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 135 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 135 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 135 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 135 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 93 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.SMARCA4.MCF-7_ARID1A-KO 135 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 135 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 115 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 135 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 122 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 135 bp overlap
ZNF76 1 dataset
ChIP HEK293 GSE76494.ZNF76.HEK293 124 bp overlap