chr5 : 120,867,124 – 120,867,497
373 bp 30 TFs 0 linked genes
This 373 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:120,862,124 – 120,872,497
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 59 bp overlap
BRD4 1 dataset
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 108 bp overlap
CEBPA 1 dataset
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 130 bp overlap
CEBPB 1 dataset
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 80 bp overlap
CTCF 59 datasets
ChIP 22Rv1 ENCFF466OXN 373 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 310 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 258 bp overlap
ChIP C4-2B ENCFF821XVN 373 bp overlap
ChIP C4-2B ENCFF821XVN 373 bp overlap
ChIP GM23338 ENCFF531QOI 227 bp overlap
ChIP GM23338 ENCFF531QOI 296 bp overlap
ChIP GM23338 ENCFF772DML 144 bp overlap
ChIP H1 ENCFF230QSV 154 bp overlap
ChIP H1 ENCFF414GZI 185 bp overlap
ChIP H1 ENCFF764RHO 201 bp overlap
ChIP H9 ENCFF152GTF 226 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 166 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 108 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 166 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 156 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 165 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 144 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 183 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 170 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 176 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 194 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 166 bp overlap
ChIP HCT116 ENCFF209YMI 176 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 124 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 274 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 154 bp overlap
ChIP MCF-7 ENCFF414SZG 174 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF844STM 177 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 203 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 118 bp overlap
ChIP RWPE2 ENCFF911IEE 373 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 82 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 135 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 102 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 145 bp overlap
ChIP chondrocyte ENCFF134ORZ 307 bp overlap
ChIP chondrocyte ENCFF134ORZ 373 bp overlap
ChIP endodermal cell ENCFF471YCZ 210 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 183 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 196 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 120 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 90 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 80 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 80 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 169 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 102 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 163 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 126 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 98 bp overlap
ChIP neural progenitor cell ENCFF420RBO 162 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 190 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 101 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 156 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 155 bp overlap
Cebpa 7 datasets
ChIP BLaER1 ENCFF031ISE 255 bp overlap
ChIP BLaER1 ENCFF093OYK 256 bp overlap
ChIP BLaER1 ENCFF262VBH 240 bp overlap
ChIP BLaER1 ENCFF335XTP 251 bp overlap
ChIP BLaER1 ENCFF364PUR 289 bp overlap
ChIP BLaER1 ENCFF798NMV 255 bp overlap
ChIP BLaER1 ENCFF858JKM 257 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
E2F2 2 datasets
Motif DE_12h DE_12h-E2F2_MA0864.3 13 bp overlap
Motif ES_0h ES_0h-E2F2_MA0864.3 13 bp overlap
E2F4 2 datasets
Motif DE_12h DE_12h-E2F4_MA0470.3 13 bp overlap
Motif ES_0h ES_0h-E2F4_MA0470.3 13 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif ES_0h ES_0h-ELK1HOXB13_MA1932.2 15 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 176 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 193 bp overlap
ChIP H1 ENCFF967OJF 190 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 158 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 175 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 71 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF417 2 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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