Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 225 bp overlap

ASCL1 5 datasets

Motif DE_36h DE_36h-ASCL1_MA1100.3 8 bp overlap

Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap

ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 135 bp overlap

ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 153 bp overlap

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 132 bp overlap

Ascl2 1 dataset

Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap

BRD3 1 dataset

ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 240 bp overlap

BRD4 5 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 313 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 189 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 353 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 269 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 192 bp overlap

Bach1::Mafk 2 datasets

Motif DE_24h DE_24h-Bach1Mafk_MA0591.2 12 bp overlap

Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 229 bp overlap

CTCF 13 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 242 bp overlap

ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 138 bp overlap

ChIP NB69 GSE101295.CTCF.NB69 211 bp overlap

ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 424 bp overlap

ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 368 bp overlap

ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 510 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap

ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap

ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 184 bp overlap

ChIP endodermal cell ENCFF471YCZ 335 bp overlap

ChIP heart ENCSR232OFD.CTCF.heart 237 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 138 bp overlap

ChIP osteocyte ENCFF929FPD 322 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 251 bp overlap

ERF::NHLH1 1 dataset

Motif DE_36h DE_36h-ERFNHLH1_MA1938.2 16 bp overlap

ESR1 3 datasets

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 473 bp overlap

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 397 bp overlap

ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 476 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 141 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 467 bp overlap

GFI1 1 dataset

Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 201 bp overlap

GRHL2 1 dataset

ChIP LNCaP GSE80256.GRHL2.LNCaP 179 bp overlap

HAND2 2 datasets

Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 321 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 120 bp overlap

MAF::NFE2 2 datasets

Motif DE_24h DE_24h-MAFNFE2_MA0501.2 11 bp overlap

Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 2 datasets

Motif DE_24h DE_24h-MAFGNFE2L1_MA0089.3 11 bp overlap

Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 2 datasets

Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap

Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 348 bp overlap

MYF5 1 dataset

ChIP Rh18 GSE84628.MYF5.Rh18 248 bp overlap

MYOD1 3 datasets

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 267 bp overlap

ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 215 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 395 bp overlap

MYOG 1 dataset

Motif DE_36h DE_36h-MYOG_MA0500.3 8 bp overlap

Mafg 2 datasets

Motif DE_24h DE_24h-Mafg_MA0659.4 12 bp overlap

Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap

NHLH1 1 dataset

Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap

Neurod2 1 dataset

Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap

Nfe2l2 2 datasets

Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap

Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap

Olig2 1 dataset

Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 623 bp overlap

RAD21 2 datasets

ChIP RH4 GSE83726.RAD21.RH4 217 bp overlap

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 181 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 344 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 244 bp overlap

SMARCA4 1 dataset

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 369 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 212 bp overlap

STAT5A 1 dataset

ChIP MV4-11 GSE64862.STAT5A.MV4-11 143 bp overlap

TBX5 1 dataset

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 224 bp overlap

TRIM28 1 dataset

ChIP AF22 GSE84259.TRIM28.AF22 168 bp overlap

Tcf12 1 dataset

Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap

USF1 2 datasets

Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap

Motif DE_36h DE_36h-USF1_MA0093.4 10 bp overlap

YY1 3 datasets

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 185 bp overlap

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 268 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap

YY2 3 datasets

ChIP HEK293 ENCFF997QEP 397 bp overlap

ChIP HEK293 ENCSR692HSE.YY2.HEK293 409 bp overlap

ChIP HeLa GSE76856.YY2.HeLa 168 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 352 bp overlap

ZNF547 2 datasets

ChIP HEK293 ENCFF693MRM 361 bp overlap

ChIP HEK293 ENCSR909TSW.ZNF547.HEK293 451 bp overlap

ZSCAN22 1 dataset

ChIP HEK293 GSE76494.ZSCAN22.HEK293 185 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Genome Browser