chr1 : 90,712,970 90,713,461
491 bp 24 TFs 1 linked gene
This 491 bp open chromatin element is linked to ENSG00000287076 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287076 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:90,707,970 – 90,718,461
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 69 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 256 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 438 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 438 bp overlap
BRD4 2 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 491 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 311 bp overlap
CBX7 3 datasets
ChIP hESC GSE133412.CBX7.hESC 151 bp overlap
ChIP hESC_QKO GSE133412.CBX7.hESC_QKO 132 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 153 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 491 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 377 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 195 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 341 bp overlap
EZH2 22 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 278 bp overlap
ChIP GM23338 ENCFF613YON 368 bp overlap
ChIP GM23338 ENCFF613YON 203 bp overlap
ChIP H1 ENCFF232NZA 491 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 81 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 465 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 356 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 62 bp overlap
ChIP PC-3 ENCFF928VSN 444 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 217 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 491 bp overlap
ChIP astrocyte ENCFF365JTP 208 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 393 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 252 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 453 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 154 bp overlap
ChIP hepatocyte ENCFF552DZB 491 bp overlap
ChIP hepatocyte ENCFF552DZB 105 bp overlap
ChIP keratinocyte ENCFF070STK 321 bp overlap
ChIP neural progenitor cell ENCFF018MKA 491 bp overlap
ChIP neural progenitor cell ENCFF472NFV 491 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 59 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 266 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 359 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 397 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 224 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 491 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 376 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 255 bp overlap
JARID2 5 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 229 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 323 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 59 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 370 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 72 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 438 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 213 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 213 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 408 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 491 bp overlap
REST 1 dataset
ChIP LNCaP GSE119385.REST.LNCaP 151 bp overlap
RNF2 4 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 61 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 291 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 196 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 100 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 326 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 316 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 472 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 193 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 167 bp overlap
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 94 bp overlap
SUZ12 4 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 230 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 271 bp overlap
ChIP H1 ENCFF881NFR 491 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 56 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 202 bp overlap