Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

AR 3 datasets

ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 186 bp overlap

ChIP VCaP GSE148358.AR.VCaP 137 bp overlap

ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 77 bp overlap

CBFA2T3 1 dataset

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 187 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

DUXA 1 dataset

Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap

EZH2 1 dataset

ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 222 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXA1 19 datasets

ChIP LNCaP GSE64656.FOXA1.LNCaP 138 bp overlap

ChIP LNCaP GSE52725.FOXA1.LNCaP 165 bp overlap

ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 101 bp overlap

ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 85 bp overlap

ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 132 bp overlap

ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 234 bp overlap

ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 198 bp overlap

ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 119 bp overlap

ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 266 bp overlap

ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 176 bp overlap

ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap

ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 78 bp overlap

ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 262 bp overlap

ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 394 bp overlap

ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 169 bp overlap

ChIP liver ERP002306.FOXA1.liver 106 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 160 bp overlap

ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 163 bp overlap

ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 188 bp overlap

FOXA2 4 datasets

ChIP DE DE-FOXA2-1 283 bp overlap

ChIP DE DE-FOXA2-2 262 bp overlap

ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 178 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 203 bp overlap

GATA1::TAL1 1 dataset

Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 394 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 380 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 394 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 394 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 394 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 366 bp overlap

HIF1A 1 dataset

ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 190 bp overlap

HSF1 1 dataset

ChIP MO91 GSE45852.HSF1.MO91 79 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 278 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 326 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 366 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 160 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MYF6 1 dataset

Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

NANOG 3 datasets

ChIP WA01 ENCSR000BMT.NANOG.WA01 170 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 152 bp overlap

ChIP hESC GSE18292.NANOG.hESC 192 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 329 bp overlap

NOTCH3 1 dataset

ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 127 bp overlap

NRF1 1 dataset

ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 186 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 181 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RAD21 1 dataset

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 128 bp overlap

SIX2 1 dataset

ChIP HEK GSE73865.SIX2.HEK 237 bp overlap

SMAD2 2 datasets

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 194 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 394 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 394 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 394 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 394 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 381 bp overlap

SMC3 1 dataset

ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 156 bp overlap

SNAI2 2 datasets

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX2 2 datasets

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 212 bp overlap

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

STAT3 2 datasets

ChIP HCC1187 GSE152203.STAT3.HCC1187 218 bp overlap

ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 167 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 186 bp overlap

TAL1 1 dataset

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap

TBXT 1 dataset

Motif DE_12h DE_12h-TBXT_MA0009.2 16 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 1 dataset

Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap

TP53 1 dataset

ChIP IMR-90 GSE42728.TP53.IMR-90 115 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF143 1 dataset

ChIP HeLa GSE39263.ZNF143.HeLa 229 bp overlap

ZNF416 1 dataset

Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap

Genome Browser