chr5 : 18,368,677 18,369,760
1,083 bp 26 TFs 2 linked genes
This 1.1 kb open chromatin element is linked to BASP1 and BASP1-AS1 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
BASP1 1152.3 kb Distal Multiome+HiCAR
BASP1-AS1 1152.5 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:18,363,677 – 18,374,760
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
GATA3 5 datasets
ChIP MCF-7 GSE133072.GATA3.MCF-7 377 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 286 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 140 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 161 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 234 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 944 bp overlap
ChIP DE DE-GATA4-2 857 bp overlap
ChIP foregut GSE117136.GATA4.foregut 290 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 931 bp overlap
ChIP DE DE-GATA6-2 739 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 939 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 830 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 202 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 133 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 129 bp overlap
POU2F3 3 datasets
Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap
Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap
Motif DE_72h DE_72h-POU2F3_MA0627.3 9 bp overlap
POU3F1 3 datasets
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap
RNF2 1 dataset
ChIP A-549 ENCSR798EGJ.RNF2.A-549 224 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 768 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 824 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 718 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SPI1 2 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 159 bp overlap
ChIP HL-60 ENCFF645GBT 250 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 80 bp overlap
YBX1 1 dataset
ChIP HEL GSE146717.YBX1.HEL 263 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ChIP HEK293T GSE39263.ZNF143.HEK293T 200 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 235 bp overlap
ZNF324 2 datasets
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 161 bp overlap