chr4 : 162,105,751 162,106,026
275 bp 46 TFs 0 linked genes
This 275 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:162,100,751 – 162,111,026
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
Atoh1 1 dataset
Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 253 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 159 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 82 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ETS1 1 dataset
ChIP GM23338 ENCFF701IZH 275 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HMGA1 1 dataset
ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 176 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 275 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 181 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 275 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 275 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 275 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 275 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
POU5F1 1 dataset
ChIP WA09 GSE105028.POU5F1.WA09 236 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
SATB1 2 datasets
ChIP MCF-10A_ICRF GSE123292.SATB1.MCF-10A_ICRF 59 bp overlap
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 86 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 173 bp overlap
SMARCA4 3 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 238 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 275 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 249 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 235 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 126 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 275 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZBTB7C 1 dataset
Motif ES_0h ES_0h-ZBTB7C_MA0695.2 8 bp overlap
ZNF274 1 dataset
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap