chr4 : 154,754,153 – 154,754,831

678 bp 55 TFs 0 linked genes

This 678 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

55 transcription factors

AR 1 dataset

ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 179 bp overlap

Atf3 1 dataset

Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap

BATF 1 dataset

Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap

CEBPA 2 datasets

Motif DE_48h DE_48h-CEBPA_MA0102.5 10 bp overlap

Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap

CEBPD 2 datasets

Motif DE_48h DE_48h-CEBPD_MA0836.3 8 bp overlap

Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap

CREB1 4 datasets

ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 199 bp overlap

ChIP MCF-7 ENCFF341ZEM 417 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 280 bp overlap

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 206 bp overlap

DMRTA2 2 datasets

Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap

Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 285 bp overlap

FOSL1 1 dataset

Motif DE_60h DE_60h-FOSL1_MA0477.3 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 335 bp overlap

ChIP DE DE-FOXA2-2 366 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 380 bp overlap

ChIP DE DE-GATA4-2 472 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 365 bp overlap

ChIP DE DE-GATA6-2 391 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 404 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 279 bp overlap

HLF 2 datasets

Motif DE_48h DE_48h-HLF_MA0043.4 9 bp overlap

Motif DE_60h DE_60h-HLF_MA0043.4 9 bp overlap

Hand1 1 dataset

Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap

JUN::JUNB 1 dataset

Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 1 dataset

Motif DE_60h DE_60h-JUNB_MA0490.3 9 bp overlap

Jun 1 dataset

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

MYB 3 datasets

Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap

Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap

Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap

Mafg 1 dataset

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

NFATC3 1 dataset

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NFIL3 2 datasets

Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap

Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap

Nfat5 1 dataset

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 1 dataset

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nkx2-1 2 datasets

Motif DE_48h DE_48h-Nkx2-1_MA1994.2 7 bp overlap

Motif DE_60h DE_60h-Nkx2-1_MA1994.2 7 bp overlap

Nr1h3::Rxra 2 datasets

Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap

POU5F1 1 dataset

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 179 bp overlap

PRDM1 2 datasets

Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap

Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap

RELA 1 dataset

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 179 bp overlap

Rfx6 2 datasets

Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap

Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 199 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 397 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 460 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 396 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 271 bp overlap

SOX10 4 datasets

Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX14 2 datasets

Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap

Motif DE_60h DE_60h-SOX14_MA1562.2 9 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 347 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 382 bp overlap

SOX8 2 datasets

Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap

Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap

SP4 1 dataset

Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap

SPIC 1 dataset

Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap

TFAP2B 1 dataset

Motif DE_60h DE_60h-TFAP2B_MA0813.1 13 bp overlap

ZFP69B 1 dataset

ChIP HEK293T GSE78099.ZFP69B.HEK293T 165 bp overlap

ZNF157 2 datasets

Motif DE_48h DE_48h-ZNF157_MA2331.1 21 bp overlap

Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap

ZNF184 2 datasets

Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap

Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap

ZNF263 1 dataset

Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap

ZNF274 5 datasets

Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap

Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap

Motif DE_72h DE_72h-ZNF274_MA1592.2 12 bp overlap

ZNF547 1 dataset

Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap

ZNF677 3 datasets

Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap

Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap

ZNF708 1 dataset

Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap

Zfp335 1 dataset

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap