chr4 : 144,653,887 144,654,485
598 bp 27 TFs 2 linked genes
This 598 bp open chromatin element is linked to HHIP and HHIP-AS1 and is bound by 27 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
HHIP 7.7 kb Proximal Proximity
HHIP-AS1 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:144,648,887 – 144,659,485
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 81 bp overlap
BRD4 3 datasets
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 598 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 281 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 229 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE50622.CDK7.Jurkat 145 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 268 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 238 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 306 bp overlap
FOXA1 1 dataset
ChIP HEK293_v5_TFS GSE123618.FOXA1.HEK293_v5_TFS 311 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 264 bp overlap
ChIP DE DE-FOXA2-1 532 bp overlap
ChIP DE DE-FOXA2-2 563 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 210 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 585 bp overlap
ChIP DE DE-GATA4-2 598 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 559 bp overlap
ChIP foregut GSE117136.GATA4.foregut 482 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 524 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 370 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 598 bp overlap
ChIP DE DE-GATA6-2 598 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 498 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 386 bp overlap
ChIP foregut GSE117136.GATA6.foregut 292 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 316 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 215 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 339 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 205 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 177 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 139 bp overlap
MYB 3 datasets
ChIP DU528 GSE94000.MYB.DU528 360 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 183 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 165 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 204 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 192 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 292 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 173 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 290 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 187 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 294 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 244 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 245 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 201 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 372 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 263 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 247 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 224 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 246 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 227 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 311 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 212 bp overlap