chr4 : 115,110,811 115,111,065
254 bp 38 TFs 1 linked gene
This 254 bp open chromatin element is linked to NDST4 and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NDST4 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:115,105,811 – 115,116,065
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 162 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 131 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 194 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 254 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 159 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 208 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 254 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 254 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 193 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 254 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 254 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 177 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 223 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 151 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 87 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 172 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 254 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 254 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 183 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 218 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 230 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 210 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 254 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 254 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 196 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 254 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 254 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 254 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 165 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 254 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 254 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 199 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 201 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 193 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 189 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 254 bp overlap
SMARCA4 6 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 254 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 204 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 240 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 254 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 202 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 143 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 200 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 142 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 245 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 254 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 203 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 254 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 226 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 229 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 135 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 254 bp overlap