Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 284 bp overlap

BRD4 3 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 83 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 92 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 58 bp overlap

CBX8 1 dataset

ChIP A-549 ENCSR616MOB.CBX8.A-549 284 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 235 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 135 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 198 bp overlap

CTCF 4 datasets

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 78 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 131 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 73 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 189 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 284 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 284 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 284 bp overlap

ChIP DE DE-FOXA2-2 284 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 145 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 283 bp overlap

ChIP DE DE-GATA4-2 284 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 275 bp overlap

ChIP DE DE-GATA6-2 284 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 249 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 284 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 218 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 284 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 284 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 284 bp overlap

KLF4 2 datasets

ChIP HAP1 GSE130417.KLF4.HAP1 247 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 176 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 127 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 149 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 108 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 215 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 125 bp overlap

MYCN 3 datasets

ChIP CHP-134 GSE129588.MYCN.CHP-134 153 bp overlap

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 74 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 61 bp overlap

NANOG 7 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 281 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 156 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 284 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 284 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 276 bp overlap

ChIP hESC GSE18292.NANOG.hESC 97 bp overlap

ChIP hESC GSE20650.NANOG.hESC 151 bp overlap

NEUROD1 2 datasets

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 109 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 76 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 184 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 91 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 142 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 90 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 239 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 284 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 284 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 275 bp overlap

RAD21 3 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 284 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 284 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 198 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 155 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 275 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 284 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 262 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 251 bp overlap

SMARCA4 5 datasets

ChIP NGP GSE134626.SMARCA4.NGP 73 bp overlap

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 258 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 179 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 108 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 192 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 228 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 212 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 284 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 284 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 157 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 284 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 160 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 251 bp overlap

TRIM28 1 dataset

ChIP HEK293 ENCFF582MWI 284 bp overlap

Genome Browser